RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 RBPMS2Q6ZRY4 209 aaKnown RBP11.38□□□□□ -0.59
COL27A1-206ENST00000490831 LGI3Q8N145 548 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 SPATA25Q9BR10 227 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 C20orf24Q9BUV8 137 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 WFDC10AQ9H1F0 79 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 PRR13Q9NZ81 148 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 SMPXQ9UHP9 88 aa11.38□□□□□ -0.59
COL27A1-206ENST00000490831 IGHV7-4-1A0A0J9YVY3 117 aa11.37□□□□□ -0.59
COL27A1-206ENST00000490831 RBMY1BA6NDE4 496 aaKnown RBP11.37□□□□□ -0.59
COL27A1-206ENST00000490831 RBMY1EA6NEQ0 496 aaKnown RBP11.37□□□□□ -0.59
COL27A1-206ENST00000490831 TMEM50AO95807 157 aa11.37□□□□□ -0.59
COL27A1-206ENST00000490831 RBMY1DP0C7P1 496 aaKnown RBP11.37□□□□□ -0.59
COL27A1-206ENST00000490831 CCR6P51684 374 aa11.37□□□□□ -0.59
COL27A1-206ENST00000490831 LAMTOR1Q6IAA8 161 aa11.37□□□□□ -0.59
COL27A1-206ENST00000490831 LYZL2Q7Z4W2 148 aa11.37□□□□□ -0.59
COL27A1-206ENST00000490831 LRTM2Q8N967 370 aa11.37□□□□□ -0.59
COL27A1-206ENST00000490831 OR52B4Q8NGK2 314 aa11.37□□□□□ -0.59
COL27A1-206ENST00000490831 OR4X1Q8NH49 305 aa11.37□□□□□ -0.59
COL27A1-206ENST00000490831 SRD5A3Q9H8P0 318 aa11.37□□□□□ -0.59
COL27A1-206ENST00000490831 NDUFA13Q9P0J0 144 aa11.37□□□□□ -0.59
COL27A1-206ENST00000490831 IGHV3OR16-8A0A075B7F1 116 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 DUXBA0A1W2PPF3 345 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 CHEK1O14757 476 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 ZNF207O43670 478 aaKnown RBP11.36□□□□□ -0.59
COL27A1-206ENST00000490831 CLN5O75503 358 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 TNFRSF9Q07011 255 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 SMCO1Q147U7 214 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 TOMM20LQ6UXN7 152 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 ZNF600Q6ZNG1 722 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 RNASEH2CQ8TDP1 164 aaKnown RBP11.36□□□□□ -0.59
COL27A1-206ENST00000490831 TMEM170AQ8WVE7 144 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 CITED4Q96RK1 184 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 SDHCQ99643 169 aaPredicted RBP11.36□□□□□ -0.59
COL27A1-206ENST00000490831 FAM110AQ9BQ89 295 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 HEYLQ9NQ87 328 aaPredicted RBP11.36□□□□□ -0.59
COL27A1-206ENST00000490831 MRPL36Q9P0J6 103 aaKnown RBP11.36□□□□□ -0.59
COL27A1-206ENST00000490831 HSPB7Q9UBY9 170 aa11.36□□□□□ -0.59
COL27A1-206ENST00000490831 TRAV14DV4A0A0A6YYC5 116 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 A0A1B0GU03 582 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 CEBPZOSA8MTT3 80 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 C3orf84H3BNL1 204 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 YIF1AO95070 293 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 OPRK1P41145 380 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 RBMS2Q15434 407 aaKnown RBP11.35□□□□□ -0.59
COL27A1-206ENST00000490831 BAK1Q16611 211 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 MLANAQ16655 118 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 TMED4Q7Z7H5 227 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 TMEM116Q8NCL8 245 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 SLC24A4Q8NFF2 622 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 GINS3Q9BRX5 216 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 RHPN1-AS1Q9BWJ2 59 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 HIPK2Q9H2X6 1198 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 ZFAND3Q9H8U3 227 aa11.35□□□□□ -0.59
COL27A1-206ENST00000490831 RPS10-NUDT3A0A1W2PQS6 291 aa11.34□□□□□ -0.59
COL27A1-206ENST00000490831 NAP1L6A6NFF2 107 aa11.34□□□□□ -0.59
COL27A1-206ENST00000490831 PITX3O75364 302 aa11.34□□□□□ -0.59
COL27A1-206ENST00000490831 SLC25A4P12235 298 aa11.34□□□□□ -0.59
COL27A1-206ENST00000490831 SLC25A6P12236 298 aa11.34□□□□□ -0.59
COL27A1-206ENST00000490831 FAM90A2PQ658T7 463 aa11.34□□□□□ -0.59
COL27A1-206ENST00000490831 RNF2Q99496 336 aa11.34□□□□□ -0.59
COL27A1-206ENST00000490831 VSIRQ9H7M9 311 aa11.34□□□□□ -0.59
COL27A1-206ENST00000490831 EDA2RQ9HAV5 297 aa11.34□□□□□ -0.59
COL27A1-206ENST00000490831 U3KQ87 197 aa11.34□□□□□ -0.59
COL27A1-206ENST00000490831 NBEAL2Q6ZNJ1 2754 aa11.34□□□□□ -0.59
COL27A1-206ENST00000490831 TRAV30A0A087WSZ9 112 aa11.33□□□□□ -0.6
COL27A1-206ENST00000490831 OR4C46A6NHA9 309 aa11.33□□□□□ -0.6
COL27A1-206ENST00000490831 SFT2D2O95562 160 aa11.33□□□□□ -0.6
COL27A1-206ENST00000490831 IGKV1-17P01599 117 aa11.33□□□□□ -0.6
COL27A1-206ENST00000490831 CD5P06127 495 aa11.33□□□□□ -0.6
COL27A1-206ENST00000490831 NPY1RP25929 384 aa11.33□□□□□ -0.6
COL27A1-206ENST00000490831 UBE2MP61081 183 aaKnown RBP11.33□□□□□ -0.6
COL27A1-206ENST00000490831 PRSS54Q6PEW0 395 aa11.33□□□□□ -0.6
COL27A1-206ENST00000490831 NOXA1Q86UR1 476 aa11.33□□□□□ -0.6
COL27A1-206ENST00000490831 CENPSQ8N2Z9 138 aa11.33□□□□□ -0.6
COL27A1-206ENST00000490831 MUC7Q8TAX7 377 aa11.33□□□□□ -0.6
COL27A1-206ENST00000490831 PUS1Q9Y606 427 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL27A1-206ENST00000490831 SCGB2A1O75556 95 aa11.32□□□□□ -0.6
COL27A1-206ENST00000490831 NDUFB6O95139 128 aa11.32□□□□□ -0.6
COL27A1-206ENST00000490831 VAMP1P23763 118 aa11.32□□□□□ -0.6
COL27A1-206ENST00000490831 BMI1P35226 326 aa11.32□□□□□ -0.6
COL27A1-206ENST00000490831 ATP5IP56385 69 aaPredicted RBP11.32□□□□□ -0.6
COL27A1-206ENST00000490831 PPP1R1AQ13522 171 aa11.32□□□□□ -0.6
COL27A1-206ENST00000490831 ODF3L2Q3SX64 289 aa11.32□□□□□ -0.6
COL27A1-206ENST00000490831 TRIQKQ629K1 86 aa11.32□□□□□ -0.6
COL27A1-206ENST00000490831 DTD1Q8TEA8 209 aa11.32□□□□□ -0.6
COL27A1-206ENST00000490831 RBKSQ9H477 322 aa11.32□□□□□ -0.6
COL27A1-206ENST00000490831 NXPH3O95157 252 aa11.31□□□□□ -0.6
COL27A1-206ENST00000490831 IGLC1P0CG04 106 aa11.31□□□□□ -0.6
COL27A1-206ENST00000490831 ETFRF1Q6IPR1 90 aa11.31□□□□□ -0.6
COL27A1-206ENST00000490831 OR1S2Q8NGQ3 325 aa11.31□□□□□ -0.6
COL27A1-206ENST00000490831 C7orf50Q9BRJ6 194 aaKnown RBP11.31□□□□□ -0.6
COL27A1-206ENST00000490831 GGTLC1Q9BX51 225 aa11.31□□□□□ -0.6
COL27A1-206ENST00000490831 TMED3Q9Y3Q3 217 aa11.31□□□□□ -0.6
COL27A1-206ENST00000490831 LOC102724200A0A096LPH7 203 aaPredicted RBP11.3□□□□□ -0.6
COL27A1-206ENST00000490831 IGHV3-49A0A0A0MS15 119 aa11.3□□□□□ -0.6
COL27A1-206ENST00000490831 FAM90A26D6RGX4 464 aa11.3□□□□□ -0.6
COL27A1-206ENST00000490831 APOHP02749 345 aaPredicted RBP11.3□□□□□ -0.6
COL27A1-206ENST00000490831 CRYBB3P26998 211 aa11.3□□□□□ -0.6
COL27A1-206ENST00000490831 BTCP35070 178 aa11.3□□□□□ -0.6
COL27A1-206ENST00000490831 INPP1P49441 399 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms