RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 LPCAT3Q6P1A2 487 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 Q6ZRM9 215 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 DUSP18Q8NEJ0 188 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 U3KQE9 123 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 A0A1B0GVY2 172 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 KNCNA6PVL3 124 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 CD5P06127 495 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 ETV6P41212 452 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 NPBWR1P48145 328 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 TCTAP57738 103 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 RND3P61587 244 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 Q6ZTC4 211 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 GINS3Q9BRX5 216 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 SCRT1Q9BWW7 348 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 Q9H521 79 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 SCPEP1Q9HB40 452 aa11.23□□□□□ -0.61
COL2A1-207ENST00000490609 HSPG2P98160 4391 aa11.22□□□□□ -0.61
COL2A1-207ENST00000490609 DNASE2O00115 360 aaPredicted RBP11.22□□□□□ -0.61
COL2A1-207ENST00000490609 APOA1P02647 267 aa11.22□□□□□ -0.61
COL2A1-207ENST00000490609 HLA-DMBP28068 263 aa11.22□□□□□ -0.61
COL2A1-207ENST00000490609 SNX29P2Q8IUI4 249 aa11.22□□□□□ -0.61
COL2A1-207ENST00000490609 COMMD3Q9UBI1 195 aa11.22□□□□□ -0.61
COL2A1-207ENST00000490609 CELA1Q9UNI1 258 aa11.22□□□□□ -0.61
COL2A1-207ENST00000490609 CLN5O75503 358 aa11.21□□□□□ -0.61
COL2A1-207ENST00000490609 NPPCP23582 126 aa11.21□□□□□ -0.61
COL2A1-207ENST00000490609 NCS1P62166 190 aa11.21□□□□□ -0.61
COL2A1-207ENST00000490609 STHQ8IWL8 128 aa11.21□□□□□ -0.61
COL2A1-207ENST00000490609 OR4D10Q8NGI6 311 aa11.21□□□□□ -0.61
COL2A1-207ENST00000490609 OR4X1Q8NH49 305 aa11.21□□□□□ -0.61
COL2A1-207ENST00000490609 GRAMD2BQ96HH9 432 aa11.21□□□□□ -0.61
COL2A1-207ENST00000490609 CLEC5AQ9NY25 188 aa11.21□□□□□ -0.61
COL2A1-207ENST00000490609 KLK11Q9UBX7 282 aa11.21□□□□□ -0.61
COL2A1-207ENST00000490609 RABAC1Q9UI14 185 aa11.21□□□□□ -0.61
COL2A1-207ENST00000490609 C11orf94C9JXX5 98 aa11.2□□□□□ -0.62
COL2A1-207ENST00000490609 HPGDSO60760 199 aa11.2□□□□□ -0.62
COL2A1-207ENST00000490609 ZNF688P0C7X2 276 aa11.2□□□□□ -0.62
COL2A1-207ENST00000490609 RCVRNP35243 200 aa11.2□□□□□ -0.62
COL2A1-207ENST00000490609 RPL5P46777 297 aaKnown RBP11.2□□□□□ -0.62
COL2A1-207ENST00000490609 P2RY1P47900 373 aa11.2□□□□□ -0.62
COL2A1-207ENST00000490609 PIGPP57054 158 aa11.2□□□□□ -0.62
COL2A1-207ENST00000490609 RPL11P62913 178 aaKnown RBP11.2□□□□□ -0.62
COL2A1-207ENST00000490609 C12orf74Q32Q52 190 aa11.2□□□□□ -0.62
COL2A1-207ENST00000490609 SP6Q3SY56 376 aa11.2□□□□□ -0.62
COL2A1-207ENST00000490609 TIGITQ495A1 244 aa11.2□□□□□ -0.62
COL2A1-207ENST00000490609 AARDQ4LEZ3 155 aa11.2□□□□□ -0.62
COL2A1-207ENST00000490609 TMEM170AQ8WVE7 144 aa11.2□□□□□ -0.62
COL2A1-207ENST00000490609 IGHV4-4A0A075B6R2 117 aa11.19□□□□□ -0.62
COL2A1-207ENST00000490609 MIFP14174 115 aa11.19□□□□□ -0.62
COL2A1-207ENST00000490609 SNCAP37840 140 aa11.19□□□□□ -0.62
COL2A1-207ENST00000490609 STXBP6Q8NFX7 210 aa11.19□□□□□ -0.62
COL2A1-207ENST00000490609 LHFPL5Q8TAF8 219 aa11.19□□□□□ -0.62
COL2A1-207ENST00000490609 GLMPQ8WWB7 406 aa11.19□□□□□ -0.62
COL2A1-207ENST00000490609 NACAE9PAV3 2078 aa11.19□□□□□ -0.62
COL2A1-207ENST00000490609 C3orf85A0A1B0GTC6 90 aa11.18□□□□□ -0.62
COL2A1-207ENST00000490609 NXPH3O95157 252 aa11.18□□□□□ -0.62
COL2A1-207ENST00000490609 IFNA17P01571 189 aa11.18□□□□□ -0.62
COL2A1-207ENST00000490609 CD3DP04234 171 aa11.18□□□□□ -0.62
COL2A1-207ENST00000490609 VBP1P61758 197 aa11.18□□□□□ -0.62
COL2A1-207ENST00000490609 ZNF767PQ75MW2 155 aa11.18□□□□□ -0.62
COL2A1-207ENST00000490609 SLC35G3Q8N808 338 aa11.18□□□□□ -0.62
COL2A1-207ENST00000490609 OR52I2Q8NH67 350 aa11.18□□□□□ -0.62
COL2A1-207ENST00000490609 ZNF486Q96H40 463 aaPredicted RBP11.18□□□□□ -0.62
COL2A1-207ENST00000490609 RAB40CQ96S21 281 aa11.18□□□□□ -0.62
COL2A1-207ENST00000490609 ABHD1Q96SE0 405 aa11.18□□□□□ -0.62
COL2A1-207ENST00000490609 FUNDC2Q9BWH2 189 aa11.18□□□□□ -0.62
COL2A1-207ENST00000490609 IGLC1P0CG04 106 aa11.17□□□□□ -0.62
COL2A1-207ENST00000490609 SPP1P10451 314 aa11.17□□□□□ -0.62
COL2A1-207ENST00000490609 UCP1P25874 307 aa11.17□□□□□ -0.62
COL2A1-207ENST00000490609 S100GP29377 79 aa11.17□□□□□ -0.62
COL2A1-207ENST00000490609 RNASE12Q5GAN4 147 aaKnown RBP11.17□□□□□ -0.62
COL2A1-207ENST00000490609 ACTL10Q5JWF8 245 aa11.17□□□□□ -0.62
COL2A1-207ENST00000490609 PRSS54Q6PEW0 395 aa11.17□□□□□ -0.62
COL2A1-207ENST00000490609 MORN3Q6PF18 240 aaPredicted RBP11.17□□□□□ -0.62
COL2A1-207ENST00000490609 C16orf54Q6UWD8 224 aa11.17□□□□□ -0.62
COL2A1-207ENST00000490609 METTL26Q96S19 204 aa11.17□□□□□ -0.62
COL2A1-207ENST00000490609 LRP1BQ9NZR2 4599 aa11.17□□□□□ -0.62
COL2A1-207ENST00000490609 TRAV10A0A0B4J240 114 aa11.16□□□□□ -0.62
COL2A1-207ENST00000490609 SMIM31A0A1B0GVY4 71 aa11.16□□□□□ -0.62
COL2A1-207ENST00000490609 A0A1W2PS18 150 aa11.16□□□□□ -0.62
COL2A1-207ENST00000490609 RTL8CO15255 209 aa11.16□□□□□ -0.62
COL2A1-207ENST00000490609 PGAM2P15259 253 aa11.16□□□□□ -0.62
COL2A1-207ENST00000490609 TMEM41BQ5BJD5 291 aa11.16□□□□□ -0.62
COL2A1-207ENST00000490609 TMEM231Q9H6L2 316 aa11.16□□□□□ -0.62
COL2A1-207ENST00000490609 MTFP1Q9UDX5 166 aa11.16□□□□□ -0.62
COL2A1-207ENST00000490609 TBC1D24Q9ULP9 559 aa11.16□□□□□ -0.62
COL2A1-207ENST00000490609 CORTO00230 105 aa11.15□□□□□ -0.62
COL2A1-207ENST00000490609 CDS2O95674 445 aa11.15□□□□□ -0.62
COL2A1-207ENST00000490609 CD74P04233 296 aa11.15□□□□□ -0.62
COL2A1-207ENST00000490609 OPRK1P41145 380 aa11.15□□□□□ -0.62
COL2A1-207ENST00000490609 AKR1C2P52895 323 aa11.15□□□□□ -0.62
COL2A1-207ENST00000490609 SUB1P53999 127 aaKnown RBP eCLIP11.15□□□□□ -0.62
COL2A1-207ENST00000490609 USF2Q15853 346 aaPredicted RBP11.15□□□□□ -0.62
COL2A1-207ENST00000490609 OR13C8Q8NGS7 320 aa11.15□□□□□ -0.62
COL2A1-207ENST00000490609 TERB2Q8NHR7 220 aa11.15□□□□□ -0.62
COL2A1-207ENST00000490609 GLYATL2Q8WU03 294 aa11.15□□□□□ -0.62
COL2A1-207ENST00000490609 TMEM230Q96A57 120 aa11.15□□□□□ -0.62
COL2A1-207ENST00000490609 RTBDNQ9BSG5 229 aaPredicted RBP11.15□□□□□ -0.62
COL2A1-207ENST00000490609 RNF126Q9BV68 326 aa11.15□□□□□ -0.62
COL2A1-207ENST00000490609 NAA50Q9GZZ1 169 aaKnown RBP11.15□□□□□ -0.62
COL2A1-207ENST00000490609 A0A087WXM4 84 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms