RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ZNF80P51504 273 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 NDUFA6P56556 154 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 PLCXD2Q0VAA5 305 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 NEDD8Q15843 81 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 LGALS9BQ3B8N2 356 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 C10orf91Q5T1B1 145 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 LGALS9CQ6DKI2 356 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 SPINT4Q6UDR6 99 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 SPATA12Q7Z6I5 190 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 PPTC7Q8NI37 304 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 FNDC9Q8TBE3 224 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 SLAMF6Q96DU3 332 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 TEX37Q96LM6 180 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 AP1S3Q96PC3 154 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 GGACTQ9BVM4 153 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 SLC39A9Q9NUM3 307 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 MCTS1Q9ULC4 181 aaKnown RBP2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 LINC00588Q9Y4M8 146 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 OVOS2A0A0G2JMS6 1433 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 CD109Q6YHK3 1445 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 BICRAQ9NZM4 1560 aa2.49□□□□□ -2.01
HMGB1P38-201ENST00000490557 MYH2Q9UKX2 1941 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 TRBV24-1A0A075B6N3 115 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 IGKV3D-11A0A0A0MRZ8 115 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 H7BYZ3 331 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 J3QR89 54 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 LYZL6O75951 148 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 IGHV3-30-3P0DP02 117 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 FKBP2P26885 142 aaKnown RBP2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 SRP14P37108 136 aaKnown RBP2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 MPV17P39210 176 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 YPEL3P61236 119 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 EIF5AP63241 154 aaKnown RBP2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 SELENOWP63302 87 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 MEF2BQ02080 365 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 AKR1C1Q04828 323 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 RPL18Q07020 188 aaKnown RBP2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 SLC38A11Q08AI6 406 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 SPANXN3Q5MJ09 141 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 C1orf140Q5VVS0 124 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 ZNF767PQ75MW2 155 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 TRAPPC6BQ86SZ2 158 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 PRR15Q8IV56 129 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 SLC30A7Q8NEW0 376 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 ARL11Q969Q4 196 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 CARD19Q96LW7 228 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 TP53RKQ96S44 253 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 LXNQ9BS40 222 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 MND1Q9BWT6 205 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 OR8D2Q9GZM6 311 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 TCEAL2Q9H3H9 227 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 XAGE1AQ9HD64 81 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 NAT8BQ9UHF3 227 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 GNG8Q9UK08 70 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 ICOSQ9Y6W8 199 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 CHD5Q8TDI0 1954 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 CEP170Q5SW79 1584 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 RTL9Q8NET4 1388 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 SVILO95425 2214 aa2.48□□□□□ -2.01
HMGB1P38-201ENST00000490557 TAF1LQ8IZX4 1826 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 HECW1Q76N89 1606 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 A0A1B0GW64 132 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 IRGMA1A4Y4 181 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 FAM92AA1XBS5 289 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 GRIFINA4D1Z8 144 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 ARRDC5A6NEK1 342 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 ZNF860A6NHJ4 632 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 FABP5P3A8MUU1 101 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 A8MWP6 167 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 H3BMM0 161 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 LEPROTO15243 131 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 OR2T1O43869 369 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 GGCTO75223 188 aaKnown RBP2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 C1QAP02745 245 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 TSPAN19P0C672 248 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 LGALS3P17931 250 aaKnown RBP2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 FXYD7P58549 80 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 NCS1P62166 190 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 HIST1H4AP62805 103 aaKnown RBP2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 BIKQ13323 160 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 VMA21Q3ZAQ7 101 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 ADM2Q7Z4H4 148 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 C10orf126Q8N4M7 172 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 OR52R1Q8NGF1 315 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 OR2T10Q8NGZ9 312 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 UBE2WQ96B02 151 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 ZNF471Q9BX82 626 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 LPAR5Q9H1C0 372 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 C11orf1Q9H5F2 150 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 LINC00574Q9H8X3 128 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 OTORQ9NRC9 128 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 NAT8Q9UHE5 227 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 ERG28Q9UKR5 140 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 PTPRGP23470 1445 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 CRB1P82279 1406 aa2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 SMG6Q86US8 1419 aaKnown RBP2.47□□□□□ -2.01
HMGB1P38-201ENST00000490557 ANKRD12Q6UB98 2062 aa2.46□□□□□ -2.01
HMGB1P38-201ENST00000490557 OVOS2A0A0J9YW53 1432 aa2.46□□□□□ -2.02
HMGB1P38-201ENST00000490557 OVOS2Q6IE36 1432 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms