RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 TNXAQ16473 311 aa12.37□□□□□ -0.43
PCCB-218ENST00000490504 TMEM219Q86XT9 240 aa12.37□□□□□ -0.43
PCCB-218ENST00000490504 NPBQ8NG41 125 aa12.37□□□□□ -0.43
PCCB-218ENST00000490504 OR2T10Q8NGZ9 312 aa12.37□□□□□ -0.43
PCCB-218ENST00000490504 EAF1Q96JC9 268 aaPredicted RBP12.37□□□□□ -0.43
PCCB-218ENST00000490504 FBXL15Q9H469 300 aa12.37□□□□□ -0.43
PCCB-218ENST00000490504 A0A1B0GW64 132 aa12.36□□□□□ -0.43
PCCB-218ENST00000490504 SNRNP70P08621 437 aaKnown RBP12.36□□□□□ -0.43
PCCB-218ENST00000490504 WT1-ASQ06250 92 aa12.36□□□□□ -0.43
PCCB-218ENST00000490504 HES1Q14469 280 aa12.36□□□□□ -0.43
PCCB-218ENST00000490504 TMEM41BQ5BJD5 291 aa12.36□□□□□ -0.43
PCCB-218ENST00000490504 HIST2H2BDQ6DRA6 164 aa12.36□□□□□ -0.43
PCCB-218ENST00000490504 NPFFR1Q9GZQ6 430 aa12.36□□□□□ -0.43
PCCB-218ENST00000490504 NPVFQ9HCQ7 196 aa12.36□□□□□ -0.43
PCCB-218ENST00000490504 KIAA1456Q9P272 454 aa12.36□□□□□ -0.43
PCCB-218ENST00000490504 WIPF1O43516 503 aa12.35□□□□□ -0.43
PCCB-218ENST00000490504 NDUFA3O95167 84 aa12.35□□□□□ -0.43
PCCB-218ENST00000490504 MBP02144 154 aa12.35□□□□□ -0.43
PCCB-218ENST00000490504 H2AFB1P0C5Y9 115 aa12.35□□□□□ -0.43
PCCB-218ENST00000490504 SUB1P53999 127 aaKnown RBP eCLIP12.35□□□□□ -0.43
PCCB-218ENST00000490504 GNB1P62873 340 aa12.35□□□□□ -0.43
PCCB-218ENST00000490504 HNF4GQ14541 408 aa12.35□□□□□ -0.43
PCCB-218ENST00000490504 ARSJQ5FYB0 599 aaPredicted RBP12.35□□□□□ -0.43
PCCB-218ENST00000490504 LFNGQ8NES3 379 aa12.35□□□□□ -0.43
PCCB-218ENST00000490504 LINC00052Q96N35 136 aa12.35□□□□□ -0.43
PCCB-218ENST00000490504 RPRMQ9NS64 109 aa12.35□□□□□ -0.43
PCCB-218ENST00000490504 AGPAT2O15120 278 aa12.34□□□□□ -0.43
PCCB-218ENST00000490504 SOX15O60248 233 aa12.34□□□□□ -0.43
PCCB-218ENST00000490504 OR13C7P0DN81 318 aa12.34□□□□□ -0.43
PCCB-218ENST00000490504 ELLP55199 621 aaPredicted RBP12.34□□□□□ -0.43
PCCB-218ENST00000490504 EBI3Q14213 229 aa12.34□□□□□ -0.43
PCCB-218ENST00000490504 BPIFCQ8NFQ6 507 aa12.34□□□□□ -0.43
PCCB-218ENST00000490504 OR2T6Q8NHC8 308 aa12.34□□□□□ -0.43
PCCB-218ENST00000490504 VSIRQ9H7M9 311 aa12.34□□□□□ -0.43
PCCB-218ENST00000490504 ZNF702PQ9H963 129 aa12.34□□□□□ -0.43
PCCB-218ENST00000490504 WNK1Q9H4A3 2382 aa12.34□□□□□ -0.43
PCCB-218ENST00000490504 IGLC7A0M8Q6 106 aa12.33□□□□□ -0.43
PCCB-218ENST00000490504 HBE1P02100 147 aa12.33□□□□□ -0.43
PCCB-218ENST00000490504 CD24P25063 80 aa12.33□□□□□ -0.43
PCCB-218ENST00000490504 RAB2AP61019 212 aa12.33□□□□□ -0.43
PCCB-218ENST00000490504 FFAR4Q5NUL3 377 aa12.33□□□□□ -0.43
PCCB-218ENST00000490504 ACSM6Q6P461 480 aa12.33□□□□□ -0.43
PCCB-218ENST00000490504 Q8N6K4 173 aa12.33□□□□□ -0.43
PCCB-218ENST00000490504 KLHDC1Q8N7A1 406 aa12.33□□□□□ -0.43
PCCB-218ENST00000490504 C11orf44Q8N8P7 122 aa12.33□□□□□ -0.43
PCCB-218ENST00000490504 RNASEH2CQ8TDP1 164 aaKnown RBP12.33□□□□□ -0.43
PCCB-218ENST00000490504 LSM4Q9Y4Z0 139 aaKnown RBP12.33□□□□□ -0.43
PCCB-218ENST00000490504 BRS3P32247 399 aa12.33□□□□□ -0.44
PCCB-218ENST00000490504 GPX4P36969 197 aaPredicted RBP12.33□□□□□ -0.44
PCCB-218ENST00000490504 AKR1C1Q04828 323 aa12.33□□□□□ -0.44
PCCB-218ENST00000490504 SPSB3Q6PJ21 355 aa12.33□□□□□ -0.44
PCCB-218ENST00000490504 TEPPQ6URK8 271 aa12.33□□□□□ -0.44
PCCB-218ENST00000490504 ZNF114Q8NC26 417 aa12.33□□□□□ -0.44
PCCB-218ENST00000490504 NARS2Q96I59 477 aaKnown RBP12.33□□□□□ -0.44
PCCB-218ENST00000490504 P2RX4Q99571 388 aa12.33□□□□□ -0.44
PCCB-218ENST00000490504 MGST2Q99735 147 aa12.33□□□□□ -0.44
PCCB-218ENST00000490504 SRSF8Q9BRL6 282 aaKnown RBP12.33□□□□□ -0.44
PCCB-218ENST00000490504 TREM1Q9NP99 234 aa12.33□□□□□ -0.44
PCCB-218ENST00000490504 KCNIP2Q9NS61 270 aa12.33□□□□□ -0.44
PCCB-218ENST00000490504 PITPNC1Q9UKF7 332 aa12.33□□□□□ -0.44
PCCB-218ENST00000490504 TRAV1-1A0A0B4J248 108 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 FCN1O00602 326 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 FAM106CPP0CH98 169 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 TMEM11P17152 192 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 OPRK1P41145 380 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 SSBP2P81877 361 aaPredicted RBP12.32□□□□□ -0.44
PCCB-218ENST00000490504 SRSF3P84103 164 aaKnown RBP12.32□□□□□ -0.44
PCCB-218ENST00000490504 CD69Q07108 199 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 RAB31Q13636 194 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 C5orf64Q2M2E5 130 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 Q6ZS46 218 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 Q8N2B8 174 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 FAM110DQ8TAY7 271 aaPredicted RBP12.32□□□□□ -0.44
PCCB-218ENST00000490504 SFT2D1Q8WV19 159 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 SRSF12Q8WXF0 261 aaKnown RBP12.32□□□□□ -0.44
PCCB-218ENST00000490504 CACNG8Q8WXS5 425 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 RCC1LQ96I51 464 aaKnown RBP12.32□□□□□ -0.44
PCCB-218ENST00000490504 SERTAD4Q9NUC0 356 aa12.32□□□□□ -0.44
PCCB-218ENST00000490504 A0A1B0GV50 99 aa12.31□□□□□ -0.44
PCCB-218ENST00000490504 CNIH1O95406 144 aa12.31□□□□□ -0.44
PCCB-218ENST00000490504 REG1AP05451 166 aa12.31□□□□□ -0.44
PCCB-218ENST00000490504 CD5P06127 495 aa12.31□□□□□ -0.44
PCCB-218ENST00000490504 BLCAPP62952 87 aa12.31□□□□□ -0.44
PCCB-218ENST00000490504 ACOT6Q3I5F7 207 aaPredicted RBP12.31□□□□□ -0.44
PCCB-218ENST00000490504 FBLN7Q53RD9 439 aa12.31□□□□□ -0.44
PCCB-218ENST00000490504 MBD3L1Q8WWY6 194 aa12.31□□□□□ -0.44
PCCB-218ENST00000490504 PBDC1Q9BVG4 233 aa12.31□□□□□ -0.44
PCCB-218ENST00000490504 GGTLC1Q9BX51 225 aa12.31□□□□□ -0.44
PCCB-218ENST00000490504 TMEM231Q9H6L2 316 aa12.31□□□□□ -0.44
PCCB-218ENST00000490504 TMEM218A2RU14 115 aa12.3□□□□□ -0.44
PCCB-218ENST00000490504 DEFA6Q01524 100 aa12.3□□□□□ -0.44
PCCB-218ENST00000490504 ZNF726P1Q15940 193 aa12.3□□□□□ -0.44
PCCB-218ENST00000490504 GUK1Q16774 197 aa12.3□□□□□ -0.44
PCCB-218ENST00000490504 PVRIGQ6DKI7 326 aa12.3□□□□□ -0.44
PCCB-218ENST00000490504 SLC16A13Q7RTY0 426 aa12.3□□□□□ -0.44
PCCB-218ENST00000490504 TMEM144Q7Z5S9 345 aa12.3□□□□□ -0.44
PCCB-218ENST00000490504 OR10G4Q8NGN3 311 aa12.3□□□□□ -0.44
PCCB-218ENST00000490504 OR10G9Q8NGN4 311 aa12.3□□□□□ -0.44
PCCB-218ENST00000490504 OR10G7Q8NGN6 311 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms