RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TAS2R8Q9NYW2 309 aa4.79□□□□□ -1.64
PDLIM1-203ENST00000490391 GOLT1BQ9Y3E0 138 aa4.79□□□□□ -1.64
PDLIM1-203ENST00000490391 OR2W1Q9Y3N9 320 aa4.79□□□□□ -1.64
PDLIM1-203ENST00000490391 TRAV26-1A0A087WT03 109 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 CBY3A6NI87 242 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 RBFOX2O43251 390 aaKnown RBP eCLIP4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 GNG7O60262 68 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 SLC22A5O76082 557 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 MT-CO2P00403 227 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 NPPCP23582 126 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 PPP5CP53041 499 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 GYS2P54840 703 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 TAS2R31P59538 309 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 FLOT2Q14254 428 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 FCN2Q15485 313 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 Q6ZS49 121 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 NFE4Q86UQ8 179 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 OR1L8Q8NGR8 309 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 NTN5Q8WTR8 489 aaPredicted RBP4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 GLMPQ8WWB7 406 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 FCGR1BQ92637 280 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 URM1Q9BTM9 101 aaKnown RBP4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 FGF20Q9NP95 211 aaPredicted RBP4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 TMEM140Q9NV12 185 aa4.78□□□□□ -1.64
PDLIM1-203ENST00000490391 LRCOL1A6NCL2 159 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 SIVA1O15304 175 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 NQO2P16083 231 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 NFYAP23511 347 aaPredicted RBP4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 TSPOP30536 169 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 NKX2-1P43699 371 aaPredicted RBP4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 HNRNPA3P51991 378 aaKnown RBP4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 SNRPD3P62318 126 aaKnown RBP4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 INSL4Q14641 139 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 TMPRSS11AQ6ZMR5 421 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 SPAG16Q8N0X2 631 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 OR4C16Q8NGL9 310 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 RHOXF1Q8NHV9 184 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 GNPNAT1Q96EK6 184 aaPredicted RBP4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 METTL26Q96S19 204 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 C7orf50Q9BRJ6 194 aaKnown RBP4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 AIFM2Q9BRQ8 373 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 SAV1Q9H4B6 383 aaPredicted RBP4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 CLEC2DQ9UHP7 191 aa4.77□□□□□ -1.65
PDLIM1-203ENST00000490391 ZNF705GA8MUZ8 300 aaPredicted RBP4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 M0QYG6 137 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 EBAG9O00559 213 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 M6PRP20645 277 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 RASSF2P50749 326 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 SUMO1P63165 101 aaKnown RBP4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 P2RY14Q15391 338 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 ZNF79Q15937 498 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 C16orf54Q6UWD8 224 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 SCXQ7RTU7 201 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 AMIGO2Q86SJ2 522 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 OR56B1Q8NGI3 324 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 APH1BQ8WW43 257 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 PHYHIPQ92561 330 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 HINT2Q9BX68 163 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 NRN1Q9NPD7 142 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 OAZ3Q9UMX2 235 aa4.76□□□□□ -1.65
PDLIM1-203ENST00000490391 A0A0J9YY99 117 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 PNMA8CA0A1B0GUJ8 204 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 A8MTW9 85 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 H3BNG1 76 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 ZNF701M0R085 212 aaPredicted RBP4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 MFNGO00587 321 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 RS1O15537 224 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 TNFSF12O43508 249 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 ATP8B1O43520 1251 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 TMEM50AO95807 157 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 HPRT1P00492 218 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 ALPLP05186 524 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 AZU1P20160 251 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 MAPK3P27361 379 aaPredicted RBP4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 NPBWR1P48145 328 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 PAX9P55771 341 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 PSG9Q00887 426 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 FOXI2Q6ZQN5 318 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 MOB3AQ96BX8 217 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 IGF2BP2-AS1Q96M15 143 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 GFI1Q99684 422 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 FAM107BQ9H098 131 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 FAM212BQ9NTI7 297 aaPredicted RBP4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 MRPL36Q9P0J6 103 aaKnown RBP4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 POMPQ9Y244 141 aa4.75□□□□□ -1.65
PDLIM1-203ENST00000490391 A0A096LPF7 62 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 MARCH11A6NNE9 402 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 SULT1C2O00338 296 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 CRXO43186 299 aaPredicted RBP4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 DENRO43583 198 aaKnown RBP4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 NXPH4O95158 308 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 CD1AP06126 327 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 EIF2B2P49770 351 aaKnown RBP4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 AP2S1P53680 142 aaPredicted RBP4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 MRPS15P82914 257 aaKnown RBP4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 OR5I1Q13606 314 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 AMTNQ6UX39 209 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 CADM3Q8N126 398 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 LINC00612Q8N6U2 182 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms