RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 HERV-K104P61576 105 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 PRCDQ00LT1 54 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 KCTD21Q4G0X4 260 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 SOHLH1Q5JUK2 328 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 UBE2UQ5VVX9 321 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 DHRS11Q6UWP2 260 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 Q6ZRM9 215 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 DCANP1Q8TF63 244 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 MOB3AQ96BX8 217 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 SLC25A38Q96DW6 304 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 SCRT1Q9BWW7 348 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 RABAC1Q9UI14 185 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 DAPK2Q9UIK4 370 aa5.87□□□□□ -1.47
USP39-216ENST00000490193 PUS1Q9Y606 427 aaKnown RBP eCLIP5.87□□□□□ -1.47
USP39-216ENST00000490193 TRAV18A0A075B6X5 111 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 IGHV3-66A0A0C4DH42 116 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 A0A1B0GU03 582 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 LINC00854A0A1B0GVQ3 168 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 A0A1W2PS18 150 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 EBAG9O00559 213 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 GHRHP01286 108 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 IFNA10P01566 189 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 IGHV3-48P01763 117 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 NPY1RP25929 384 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 CRYBB3P26998 211 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 CBX5P45973 191 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 NPBWR1P48145 328 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 RPL11P62913 178 aaKnown RBP5.86□□□□□ -1.47
USP39-216ENST00000490193 RNF212Q495C1 297 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 SFXN4Q6P4A7 337 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 ZNF767PQ75MW2 155 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 NEU1Q99519 415 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 C1QTNF4Q9BXJ3 329 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 AUNIPQ9H7T9 357 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 TXNL4BQ9NX01 149 aaKnown RBP5.86□□□□□ -1.47
USP39-216ENST00000490193 CLEC5AQ9NY25 188 aa5.86□□□□□ -1.47
USP39-216ENST00000490193 KNCNA6PVL3 124 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 INS-IGF2F8WCM5 200 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 TMEM50AO95807 157 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 IFNA21P01568 189 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 IFNA17P01571 189 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 ZNF688P0C7X2 276 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 BTF3P20290 206 aaKnown RBP5.85□□□□□ -1.47
USP39-216ENST00000490193 NPPCP23582 126 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 P2RY1P47900 373 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 AQP4P55087 323 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 HSPE1P61604 102 aaKnown RBP5.85□□□□□ -1.47
USP39-216ENST00000490193 ACTL10Q5JWF8 245 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 CFAP161Q6P656 301 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 CMTM1Q8IZ96 169 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 STXBP6Q8NFX7 210 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 TSPAN14Q8NG11 270 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 PINX1Q96BK5 328 aaKnown RBP5.85□□□□□ -1.47
USP39-216ENST00000490193 SEC22AQ96IW7 307 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 EHFQ9NZC4 300 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 ANAPC10Q9UM13 185 aa5.85□□□□□ -1.47
USP39-216ENST00000490193 APOBP04114 4563 aaKnown RBP5.85□□□□□ -1.47
USP39-216ENST00000490193 IGLV2-18A0A075B6J9 118 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 TMEM189A5PLL7 270 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 ZNF705FA8MVS1 300 aaPredicted RBP5.84□□□□□ -1.47
USP39-216ENST00000490193 GPR31O00270 319 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 ZNF705DP0CH99 300 aaPredicted RBP5.84□□□□□ -1.47
USP39-216ENST00000490193 ZNF705BP0CI00 300 aaPredicted RBP5.84□□□□□ -1.47
USP39-216ENST00000490193 SPART-AS1P0CW21 52 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 NUTF2P61970 127 aaKnown RBP5.84□□□□□ -1.47
USP39-216ENST00000490193 ERHP84090 104 aaKnown RBP5.84□□□□□ -1.47
USP39-216ENST00000490193 C1orf134Q5TEV5 83 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 ZNF705AQ6ZN79 300 aaPredicted RBP5.84□□□□□ -1.47
USP39-216ENST00000490193 UBE2DNLQ8IWF7 75 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 MAPKAPK5-AS1Q8N8E1 139 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 OR5H6Q8NGV6 325 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 METTL26Q96S19 204 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 RAB40CQ96S21 281 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 ZNF2Q9BSG1 426 aaPredicted RBP5.84□□□□□ -1.47
USP39-216ENST00000490193 FXYD6Q9H0Q3 95 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 SEPSECSQ9HD40 501 aaKnown RBP5.84□□□□□ -1.47
USP39-216ENST00000490193 U3KQE9 123 aa5.84□□□□□ -1.47
USP39-216ENST00000490193 TEX48A0A1B0GUV7 120 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 SMIM9A6NGZ8 99 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 C16orf90A8MZG2 172 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 CORTO00230 105 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 CLN5O75503 358 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 B3GALNT1O75752 331 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 IGKV1-39P01597 117 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 IGKV1D-39P04432 117 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 FCER2P06734 321 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 EIF2B2P49770 351 aaKnown RBP5.83□□□□□ -1.48
USP39-216ENST00000490193 FAM3BP58499 235 aaPredicted RBP5.83□□□□□ -1.48
USP39-216ENST00000490193 OXA1LQ15070 435 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 H2BFWTQ7Z2G1 175 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 Q8N1X5 172 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 OR4X1Q8NH49 305 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 OR4A16Q8NH70 328 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 NARS2Q96I59 477 aaKnown RBP5.83□□□□□ -1.48
USP39-216ENST00000490193 DIABLOQ9NR28 239 aa5.83□□□□□ -1.48
USP39-216ENST00000490193 HELTA6NFD8 242 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 H3BMM0 161 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 TMEM127O75204 238 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 IGKV1-17P01599 117 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 SDC2P34741 201 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms