RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 A0A0G2JMM0 328 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 CXorf51AA0A1B0GTR3 108 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 A0A1W2PPB8 328 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 IGLC7A0M8Q6 106 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 KIR3DP1A8MWS1 328 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 KBTBD11O94819 623 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 RCBTB2O95199 551 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 SFT2D2O95562 160 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 ERGP11308 486 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 CRISP2P16562 243 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 GABRG2P18507 467 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 PMCHP20382 165 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 F2RP25116 425 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 SRP14P37108 136 aaKnown RBP2.11□□□□□ -2.07
UBXN4-208ENST00000490163 GNB2P62879 340 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 PSG9Q00887 426 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 SRSF7Q16629 238 aaKnown RBP eCLIP2.11□□□□□ -2.07
UBXN4-208ENST00000490163 Q499Y3 187 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 TMEM128Q5BJH2 165 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 MOB1BQ7L9L4 216 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 C20orf196Q8IYI0 205 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 TMEM256Q8N2U0 113 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 SMIM20Q8N5G0 67 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF676Q8N7Q3 588 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 MORN4Q8NDC4 146 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 OR10G4Q8NGN3 311 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 OR4K13Q8NH42 304 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 FAM3DQ96BQ1 224 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 PYGO2Q9BRQ0 406 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 CMC2Q9NRP2 79 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF780BQ9Y6R6 833 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.11□□□□□ -2.07
UBXN4-208ENST00000490163 DUXBA0A1W2PPF3 345 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 ZFP92A6NM28 416 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 PIN1P1O15428 100 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 CRYGDP07320 174 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 PFN1P07737 140 aaKnown RBP2.11□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF708P17019 499 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 CMPK1P30085 196 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 GPM6AP51674 278 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 PMCHL1Q16048 86 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF324BQ6AW86 544 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-208ENST00000490163 FA2HQ7L5A8 372 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 TRAPPC6BQ86SZ2 158 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 ZFP62Q8NB50 900 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-208ENST00000490163 OR10P1Q8NGE3 313 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 PTX4Q96A99 478 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 BORCS7Q96B45 105 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 GNPNAT1Q96EK6 184 aaPredicted RBP2.11□□□□□ -2.07
UBXN4-208ENST00000490163 FAM103A1Q9BTL3 118 aaKnown RBP2.11□□□□□ -2.07
UBXN4-208ENST00000490163 LINC00470Q9BZP3 86 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 SDF2L1Q9HCN8 221 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 CKLFQ9UBR5 152 aa2.11□□□□□ -2.07
UBXN4-208ENST00000490163 IGLV8-61A0A075B6I0 122 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 CEBPZOSA8MTT3 80 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 J3QRE1 110 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 TAX1BP3O14907 124 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 HMGB3O15347 200 aaKnown RBP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 SLC25A14O95258 325 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 IGLV3-27P01718 113 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 IGLC1P0CG04 106 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 GATA2P23769 480 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 CDKN2AP42771 156 aaKnown RBP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 TRMT12Q53H54 448 aaKnown RBP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF684Q5T5D7 378 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 C2orf66Q6UXQ4 117 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 CDC20BQ86Y33 519 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 OR4D11Q8NGI4 311 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 OR5A1Q8NGJ0 315 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 ZMYND19Q96E35 227 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 C18orf15Q96N68 181 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 SH3BGRL3Q9H299 93 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 MRPL16Q9NX20 251 aaKnown RBP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 MMP17Q9ULZ9 603 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 RFNGQ9Y644 331 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 COL5A1P20908 1838 aaPredicted RBP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 GTF3C1Q12789 2109 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 A0A0J9YXV3 536 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 OR6C6A6NF89 314 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 RPL37AP8A6NKH3 93 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 C17orf112F2Z3M2 114 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 CD5LO43866 347 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 DEDDO75618 318 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 S1PR2O95136 353 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 NUDT3O95989 172 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 TYMSP04818 313 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 GYPBP06028 91 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 BCL2P10415 239 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 CCR2P41597 374 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF83P51522 516 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 SUB1P53999 127 aaKnown RBP eCLIP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 CCL20P78556 96 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 FOXF1Q12946 379 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 SRSF6Q13247 344 aaKnown RBP2.1□□□□□ -2.07
UBXN4-208ENST00000490163 FFAR4Q5NUL3 377 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 FAM78BQ5VT40 261 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 CYP2G1PQ6ZSU1 146 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 OR51G1Q8NGK1 321 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 BLNKQ8WV28 456 aa2.1□□□□□ -2.07
UBXN4-208ENST00000490163 DDB2Q92466 427 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms