RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 SPANXN5Q5MJ07 72 aa8.34□□□□□ -1.07
VPS13D-210ENST00000489961 C9orf66Q5T8R8 295 aa8.34□□□□□ -1.07
VPS13D-210ENST00000489961 TMEM170AQ8WVE7 144 aa8.34□□□□□ -1.07
VPS13D-210ENST00000489961 SMIM8Q96KF7 97 aa8.34□□□□□ -1.07
VPS13D-210ENST00000489961 RAB40CQ96S21 281 aa8.34□□□□□ -1.07
VPS13D-210ENST00000489961 ELOVL1Q9BW60 279 aa8.34□□□□□ -1.07
VPS13D-210ENST00000489961 FNDC4Q9H6D8 234 aaPredicted RBP8.34□□□□□ -1.07
VPS13D-210ENST00000489961 ZC4H2Q9NQZ6 224 aa8.34□□□□□ -1.07
VPS13D-210ENST00000489961 PSENENQ9NZ42 101 aa8.34□□□□□ -1.07
VPS13D-210ENST00000489961 PEMTQ9UBM1 199 aa8.34□□□□□ -1.07
VPS13D-210ENST00000489961 STRAPQ9Y3F4 350 aaKnown RBP8.34□□□□□ -1.07
VPS13D-210ENST00000489961 ALG5Q9Y673 324 aa8.34□□□□□ -1.07
VPS13D-210ENST00000489961 DNHD1Q96M86 4753 aa8.34□□□□□ -1.07
VPS13D-210ENST00000489961 C15orf62A8K5M9 175 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 F8W735 103 aaPredicted RBP8.33□□□□□ -1.08
VPS13D-210ENST00000489961 L7N2F9 121 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 PVALBP20472 110 aaPredicted RBP8.33□□□□□ -1.08
VPS13D-210ENST00000489961 TAS2R30P59541 319 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 VAMP2P63027 116 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 CYCSP99999 105 aaKnown RBP8.33□□□□□ -1.08
VPS13D-210ENST00000489961 CD69Q07108 199 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 OXA1LQ15070 435 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 GPHB5Q86YW7 130 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 OR9G4Q8NGQ1 327 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 OR4X1Q8NH49 305 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 MGAT4CQ9UBM8 478 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 RCL1Q9Y2P8 373 aaKnown RBP8.33□□□□□ -1.08
VPS13D-210ENST00000489961 LSM5Q9Y4Y9 91 aaKnown RBP8.33□□□□□ -1.08
VPS13D-210ENST00000489961 VWFP04275 2813 aa8.33□□□□□ -1.08
VPS13D-210ENST00000489961 TRAV30A0A087WSZ9 112 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 G3V4G9 280 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 H3BP45 60 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 K7EPK0 472 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 LGALS9O00182 355 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 TSC22D2O75157 780 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 SAP30O75446 220 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 CLN5O75503 358 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 SIX6O95475 246 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 GPX4P36969 197 aaPredicted RBP8.32□□□□□ -1.08
VPS13D-210ENST00000489961 INSL3P51460 131 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 S100A10P60903 97 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 RELQ04864 619 aaPredicted RBP8.32□□□□□ -1.08
VPS13D-210ENST00000489961 MLANAQ16655 118 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 SAMD5Q5TGI4 173 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 SLC16A13Q7RTY0 426 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 REC114Q7Z4M0 266 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 SLC35E1Q96K37 410 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 OR4C12Q96R67 309 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 CHRDL1Q9BU40 450 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 NMES1Q9C002 83 aa8.32□□□□□ -1.08
VPS13D-210ENST00000489961 IGHV3-35A0A0C4DH35 117 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 ZNF320A2RRD8 509 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 NDUFA4O00483 81 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 TMEM50AO95807 157 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 CTSGP08311 255 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 ADMP35318 185 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 RND2P52198 227 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 PAX9P55771 341 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 IL15RAQ13261 267 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 RAB32Q13637 225 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 PRSS54Q6PEW0 395 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 TMEM116Q8NCL8 245 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 CACNG8Q8WXS5 425 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 ZNF436Q9C0F3 470 aaPredicted RBP8.31□□□□□ -1.08
VPS13D-210ENST00000489961 MED28Q9H204 178 aa8.31□□□□□ -1.08
VPS13D-210ENST00000489961 ZMAT5Q9UDW3 170 aaKnown RBP8.31□□□□□ -1.08
VPS13D-210ENST00000489961 TRRAPQ9Y4A5 3859 aa8.3□□□□□ -1.08
VPS13D-210ENST00000489961 RLN2P04090 185 aa8.3□□□□□ -1.08
VPS13D-210ENST00000489961 BCAP31P51572 246 aa8.3□□□□□ -1.08
VPS13D-210ENST00000489961 H2BFSP57053 126 aa8.3□□□□□ -1.08
VPS13D-210ENST00000489961 ZNF600Q6ZNG1 722 aa8.3□□□□□ -1.08
VPS13D-210ENST00000489961 OR1S2Q8NGQ3 325 aa8.3□□□□□ -1.08
VPS13D-210ENST00000489961 NPIPB3Q92617 1050 aa8.3□□□□□ -1.08
VPS13D-210ENST00000489961 ACY3Q96HD9 319 aa8.3□□□□□ -1.08
VPS13D-210ENST00000489961 MRPL36Q9P0J6 103 aaKnown RBP8.3□□□□□ -1.08
VPS13D-210ENST00000489961 UFC1Q9Y3C8 167 aa8.3□□□□□ -1.08
VPS13D-210ENST00000489961 PKD1L1Q8TDX9 2849 aa8.3□□□□□ -1.08
VPS13D-210ENST00000489961 A8MWP6 167 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 WIPF1O43516 503 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 YIF1AO95070 293 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 SCAF4O95104 1147 aaKnown RBP8.29□□□□□ -1.08
VPS13D-210ENST00000489961 CSN3P07498 182 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 METTL15P1P0C7V9 234 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 PET100P0DJ07 73 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 OR10J1P30954 320 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 CAV2P51636 162 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 ELLP55199 621 aaPredicted RBP8.29□□□□□ -1.08
VPS13D-210ENST00000489961 GAMTQ14353 236 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 OR8G2PQ6IF36 304 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 TMEM14EPQ6UXP3 125 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 UNQ9165/PRO28630Q6UXU0 137 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 OR10P1Q8NGE3 313 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 TMEM190Q8WZ59 177 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 C20orf24Q9BUV8 137 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 SIGLEC8Q9NYZ4 499 aa8.29□□□□□ -1.08
VPS13D-210ENST00000489961 C2orf70A6NJV1 201 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 ZFP92A6NM28 416 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 PRSS46E5RG02 174 aa8.28□□□□□ -1.08
VPS13D-210ENST00000489961 DEDDO75618 318 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms