RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 TGIF2LXQ8IUE1 241 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 MMD2Q8IY49 270 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 OR1L6Q8NGR2 347 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 OR1L8Q8NGR8 309 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 TECRQ9NZ01 308 aaKnown RBP12.7□□□□□ -0.38
BRD9-208ENST00000489816 CGB1A6NKQ9 187 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 SNURFLB1AK76 121 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 CD24P25063 80 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 ZNF833PQ6ZTB9 187 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 NUP37Q8NFH4 326 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 TMEM18Q96B42 140 aa12.7□□□□□ -0.38
BRD9-208ENST00000489816 ITGB1BP1O14713 200 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 LOXP28300 417 aaPredicted RBP12.69□□□□□ -0.38
BRD9-208ENST00000489816 RANP62826 216 aaKnown RBP12.69□□□□□ -0.38
BRD9-208ENST00000489816 CORO2AQ92828 525 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 SLC35E1Q96K37 410 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 NDUFA4L2Q9NRX3 87 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 GNG5P63218 68 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 FOXL1Q12952 345 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 USF2Q15853 346 aaPredicted RBP12.69□□□□□ -0.38
BRD9-208ENST00000489816 IGF2-ASQ6U949 168 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 ST6GALNAC3Q8NDV1 305 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 OR5B3Q8NH48 314 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 FAM168AQ92567 244 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 FAM103A1Q9BTL3 118 aaKnown RBP12.69□□□□□ -0.38
BRD9-208ENST00000489816 SCNM1Q9BWG6 230 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 MRPL18Q9H0U6 180 aaKnown RBP12.69□□□□□ -0.38
BRD9-208ENST00000489816 ZNF355PQ9NSJ1 428 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 A0A1B0GV90 55 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 AREGP15514 252 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 POU2AF1Q16633 256 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 SPACA3Q8IXA5 215 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 OR4C13Q8NGP0 309 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 SLC25A33Q9BSK2 321 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 BET1LQ9NYM9 111 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 ZNF257Q9Y2Q1 563 aa12.69□□□□□ -0.38
BRD9-208ENST00000489816 LCN2P80188 198 aa12.68□□□□□ -0.38
BRD9-208ENST00000489816 OR5AN1Q8NGI8 311 aa12.68□□□□□ -0.38
BRD9-208ENST00000489816 ZNF705FA8MVS1 300 aaPredicted RBP12.68□□□□□ -0.38
BRD9-208ENST00000489816 COX7A2P2O60397 106 aa12.68□□□□□ -0.38
BRD9-208ENST00000489816 TYMSP04818 313 aa12.68□□□□□ -0.38
BRD9-208ENST00000489816 ZNF705DP0CH99 300 aaPredicted RBP12.68□□□□□ -0.38
BRD9-208ENST00000489816 ZNF705BP0CI00 300 aaPredicted RBP12.68□□□□□ -0.38
BRD9-208ENST00000489816 TNXAQ16473 311 aa12.68□□□□□ -0.38
BRD9-208ENST00000489816 ASCL5Q7RTU5 278 aa12.68□□□□□ -0.38
BRD9-208ENST00000489816 OSR1Q8TAX0 266 aaPredicted RBP12.68□□□□□ -0.38
BRD9-208ENST00000489816 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.67□□□□□ -0.38
BRD9-208ENST00000489816 A0A1W2PPI3 338 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 PKIAP61925 76 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 C2orf83Q53S99 150 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 KIR3DL3Q8N743 410 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 NAT8BQ9UHF3 227 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 C8orf88P0DMB2 117 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 TMEM249Q2WGJ8 235 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 TDRG1Q3Y452 100 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 TIGITQ495A1 244 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 BAGE3Q86Y29 109 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 BAGE2Q86Y30 109 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 GBGT1Q8N5D6 347 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 OR1B1Q8NGR6 318 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 MS4A10Q96PG2 267 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 DNAJC4Q9NNZ3 241 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 IL36BQ9NZH7 164 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 S4R3C0 116 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 SHISA9B4DS77 424 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 FKBP11Q9NYL4 201 aa12.67□□□□□ -0.38
BRD9-208ENST00000489816 SERF1AO75920 110 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 PATE2Q6UY27 113 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 V9GYV3 84 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 IGHV1-69-2A0A0G2JMI3 117 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 DLL1O00548 723 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 RNF224P0DH78 156 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 CD99P14209 185 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 CRISP2P16562 243 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 ASCL2Q99929 193 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 SLC25A2Q9BXI2 301 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 TMEM167BQ9NRX6 74 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 TP53TG3Q9ULZ0 132 aa12.66□□□□□ -0.38
BRD9-208ENST00000489816 RPEL1Q2QD12 228 aa12.65□□□□□ -0.38
BRD9-208ENST00000489816 LINC00574Q9H8X3 128 aa12.65□□□□□ -0.38
BRD9-208ENST00000489816 HIVEP3Q5T1R4 2406 aa12.65□□□□□ -0.38
BRD9-208ENST00000489816 IGHV1-8P0DP01 117 aa12.65□□□□□ -0.38
BRD9-208ENST00000489816 USF1P22415 310 aaPredicted RBP12.65□□□□□ -0.38
BRD9-208ENST00000489816 SSX2Q16385 188 aa12.65□□□□□ -0.38
BRD9-208ENST00000489816 COA6Q5JTJ3 125 aaKnown RBP12.65□□□□□ -0.38
BRD9-208ENST00000489816 NCOR1P1Q9H4R4 102 aa12.65□□□□□ -0.38
BRD9-208ENST00000489816 WASHC3Q9Y3C0 194 aa12.65□□□□□ -0.38
BRD9-208ENST00000489816 IGLV2-23P01705 113 aa12.65□□□□□ -0.39
BRD9-208ENST00000489816 MEF2CQ06413 473 aaPredicted RBP12.65□□□□□ -0.39
BRD9-208ENST00000489816 TBR1Q16650 682 aa12.65□□□□□ -0.39
BRD9-208ENST00000489816 C3orf36Q3SXR2 165 aa12.65□□□□□ -0.39
BRD9-208ENST00000489816 C10orf113Q5VZT2 155 aa12.65□□□□□ -0.39
BRD9-208ENST00000489816 LINC00305Q7Z4B0 112 aa12.65□□□□□ -0.39
BRD9-208ENST00000489816 CMTM2Q8TAZ6 248 aa12.65□□□□□ -0.39
BRD9-208ENST00000489816 FAM167A-AS1Q96KT0 104 aa12.65□□□□□ -0.39
BRD9-208ENST00000489816 TAS2R45P59539 299 aa12.64□□□□□ -0.39
BRD9-208ENST00000489816 DMRTC2Q8IXT2 367 aaPredicted RBP12.64□□□□□ -0.39
BRD9-208ENST00000489816 FBXL15Q9H469 300 aa12.64□□□□□ -0.39
BRD9-208ENST00000489816 MFAP2P55001 183 aa12.64□□□□□ -0.39
BRD9-208ENST00000489816 CDSNQ15517 529 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms