RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 PLAUP00749 431 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 LIPFP07098 398 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 DIAPH2-AS1Q14236 149 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 TEX38Q6PEX7 206 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 NEU4Q8WWR8 484 aaPredicted RBP12.05□□□□□ -0.48
COL9A1-208ENST00000489611 CBLN4Q9NTU7 201 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 IGHV1-3A0A0C4DH29 117 aa12.04□□□□□ -0.48
COL9A1-208ENST00000489611 PSMB11A5LHX3 300 aa12.04□□□□□ -0.48
COL9A1-208ENST00000489611 CRYGBP07316 175 aa12.04□□□□□ -0.48
COL9A1-208ENST00000489611 COL8A2P25067 703 aa12.04□□□□□ -0.48
COL9A1-208ENST00000489611 RPL27AP46776 148 aaKnown RBP12.04□□□□□ -0.48
COL9A1-208ENST00000489611 C4orf17Q53FE4 359 aa12.04□□□□□ -0.48
COL9A1-208ENST00000489611 LY6G5BQ8NDX9 201 aa12.04□□□□□ -0.48
COL9A1-208ENST00000489611 OCC1Q8TAD7 63 aa12.04□□□□□ -0.48
COL9A1-208ENST00000489611 ELOVL1Q9BW60 279 aa12.04□□□□□ -0.48
COL9A1-208ENST00000489611 HELTA6NFD8 242 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 COX7A2P2O60397 106 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 CRYGCP07315 174 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 OR10J4P0C629 311 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 C10orf113Q5VZT2 155 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 MOB3BQ86TA1 216 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 OR5T1Q8NG75 326 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 OR1P1Q8NH06 330 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 TMEM37Q8WXS4 190 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 RPEQ96AT9 228 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 A0A1W2PPI3 338 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 IGLC7A0M8Q6 106 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 IFITM10A6NMD0 228 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 E7EUB6 86 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 SOD3P08294 240 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 GNG4P50150 75 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 PDLIM4P50479 330 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 PPP1R27Q86WC6 154 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 TMEM116Q8NCL8 245 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 OR2T6Q8NHC8 308 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 SGMS2Q8NHU3 365 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 TMEM190Q8WZ59 177 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 EAF1Q96JC9 268 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-208ENST00000489611 SIGLEC9Q9Y336 463 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 ROS1P08922 2347 aa12.03□□□□□ -0.48
COL9A1-208ENST00000489611 SIAH2O43255 324 aa12.02□□□□□ -0.49
COL9A1-208ENST00000489611 FABP1P07148 127 aa12.02□□□□□ -0.49
COL9A1-208ENST00000489611 CEACAM3P40198 252 aa12.02□□□□□ -0.49
COL9A1-208ENST00000489611 TIGITQ495A1 244 aa12.02□□□□□ -0.49
COL9A1-208ENST00000489611 NPIPB3Q92617 1050 aa12.02□□□□□ -0.49
COL9A1-208ENST00000489611 TRGV9Q99603 122 aa12.02□□□□□ -0.49
COL9A1-208ENST00000489611 IL36BQ9NZH7 164 aa12.02□□□□□ -0.49
COL9A1-208ENST00000489611 PKDREJQ9NTG1 2253 aa12.02□□□□□ -0.49
COL9A1-208ENST00000489611 M0R1W7 72 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 TAS2R60P59551 318 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 MLANAQ16655 118 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 MRGPRG-AS1Q2M3A8 158 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 ITLN2Q8WWU7 325 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-208ENST00000489611 ZNF503Q96F45 646 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 GPR61Q9BZJ8 451 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 FNDC4Q9H6D8 234 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-208ENST00000489611 IGSF10Q6WRI0 2623 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 A0A0U1RQK1 487 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 ZNF320A2RRD8 509 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 LY6LH3BQJ8 138 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 TNXAQ16473 311 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 COX19Q49B96 90 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 FAM167A-AS1Q96KT0 104 aa12.01□□□□□ -0.49
COL9A1-208ENST00000489611 GATA2P23769 480 aaPredicted RBP12□□□□□ -0.49
COL9A1-208ENST00000489611 YPEL3P61236 119 aaPredicted RBP12□□□□□ -0.49
COL9A1-208ENST00000489611 UBE2L3P68036 154 aaKnown RBP12□□□□□ -0.49
COL9A1-208ENST00000489611 C10orf55Q5SWW7 151 aa12□□□□□ -0.49
COL9A1-208ENST00000489611 OR11H6Q8NGC7 330 aa12□□□□□ -0.49
COL9A1-208ENST00000489611 OR10D4PQ8NGN7 298 aa12□□□□□ -0.49
COL9A1-208ENST00000489611 OR1L6Q8NGR2 347 aa12□□□□□ -0.49
COL9A1-208ENST00000489611 PERPQ96FX8 193 aa12□□□□□ -0.49
COL9A1-208ENST00000489611 SLC25A2Q9BXI2 301 aa12□□□□□ -0.49
COL9A1-208ENST00000489611 GSN-AS1Q9NRJ2 163 aa12□□□□□ -0.49
COL9A1-208ENST00000489611 IGKV1D-37A0A075B6S9 117 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 TRBV9A0A0B4J1U6 114 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 CRYBB3P26998 211 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 RPL15P61313 204 aaKnown RBP11.99□□□□□ -0.49
COL9A1-208ENST00000489611 C1orf122Q6ZSJ8 110 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 OR5AU1Q8NGC0 362 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 OSTCQ9NRP0 149 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 DMRT1Q9Y5R6 373 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 TRAPPC1Q9Y5R8 145 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 F11RQ9Y624 299 aaKnown RBP11.99□□□□□ -0.49
COL9A1-208ENST00000489611 PGPEP1LA6NFU8 196 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 GGTLC3B5MD39 225 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 LYNX1G3V0Z9 82 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 ISLRO14498 428 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 LYNX1P0DP58 116 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 HTR1DP28221 377 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 CNN1P51911 297 aaKnown RBP11.99□□□□□ -0.49
COL9A1-208ENST00000489611 SUMO1P63165 101 aaKnown RBP11.99□□□□□ -0.49
COL9A1-208ENST00000489611 RPEL1Q2QD12 228 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 CENPWQ5EE01 88 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 PYY3Q5JQD4 70 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 C11orf71Q6IPW1 123 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 PACRGQ96M98 296 aaPredicted RBP11.99□□□□□ -0.49
COL9A1-208ENST00000489611 PAXXQ9BUH6 204 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 TPSG1Q9NRR2 321 aa11.99□□□□□ -0.49
COL9A1-208ENST00000489611 TNFRSF19Q9NS68 423 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms