RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 SLC25A31Q9H0C2 315 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 H3BUA1 57 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 OR2J3O76001 311 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 ZP3P21754 424 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 SULT1A1P50225 295 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 KRTAP10-3P60369 221 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 TCTEX1D4Q5JR98 221 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 ETV3LQ6ZN32 361 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 ACOT7LQ6ZUV0 252 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 STX12Q86Y82 276 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 C3orf56Q8N813 242 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 MISP3Q96FF7 219 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 AQP10Q96PS8 301 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 ARL6Q9H0F7 186 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 KRBOX1C9JBD0 128 aa11.09□□□□□ -0.63
CLDN11-209ENST00000489485 RHOGP84095 191 aa11.09□□□□□ -0.63
CLDN11-209ENST00000489485 ARL16Q0P5N6 197 aa11.09□□□□□ -0.63
CLDN11-209ENST00000489485 SLC51BQ86UW2 128 aa11.09□□□□□ -0.63
CLDN11-209ENST00000489485 OR1L6Q8NGR2 347 aa11.09□□□□□ -0.63
CLDN11-209ENST00000489485 BSCL2Q96G97 398 aaPredicted RBP11.09□□□□□ -0.63
CLDN11-209ENST00000489485 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
CLDN11-209ENST00000489485 CITED2Q99967 270 aaPredicted RBP11.09□□□□□ -0.63
CLDN11-209ENST00000489485 THYN1Q9P016 225 aa11.09□□□□□ -0.63
CLDN11-209ENST00000489485 IGLV11-55A0A075B6I3 123 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 A0A0D9SG52 128 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 TCRBV4S1A1TA0A5B7 111 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 PMS2P5A8MQ11 134 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 HIST1H1BP16401 226 aaKnown RBP11.08□□□□□ -0.64
CLDN11-209ENST00000489485 ATP5IP56385 69 aaPredicted RBP11.08□□□□□ -0.64
CLDN11-209ENST00000489485 MLANAQ16655 118 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 HAPLN4Q86UW8 402 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 NECAP1Q8NC96 275 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 OR10P1Q8NGE3 313 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 OR5C1Q8NGR4 320 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 SMIM3Q9BZL3 60 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 FBXL7Q9UJT9 491 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 TRBV9A0A0B4J1U6 114 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 IGHV3-21A0A0B4J1V1 117 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 OPRK1P41145 380 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 C15orf32Q32M92 178 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 RNF152Q8N8N0 203 aa11.08□□□□□ -0.64
CLDN11-209ENST00000489485 A0A1W2PRX2 142 aa11.07□□□□□ -0.64
CLDN11-209ENST00000489485 MFSD2BA6NFX1 497 aa11.07□□□□□ -0.64
CLDN11-209ENST00000489485 BRI3O95415 125 aa11.07□□□□□ -0.64
CLDN11-209ENST00000489485 BAXQ07812 192 aa11.07□□□□□ -0.64
CLDN11-209ENST00000489485 CLINT1Q14677 625 aa11.07□□□□□ -0.64
CLDN11-209ENST00000489485 OR5B12Q96R08 314 aa11.07□□□□□ -0.64
CLDN11-209ENST00000489485 A0A0G2JLM5 398 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 FAM223BA6NKX1 122 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 PRSS46E5RG02 174 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 CORTO00230 105 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 NDUFB8O95169 186 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 IGHV3-11P01762 117 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 HBG1P69891 147 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 HBG2P69892 147 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 ATP5G2Q06055 141 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 OR2F1Q13607 317 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 ZNF345Q14585 488 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 PVRIGQ6DKI7 326 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 FAM223AQ8IWN6 122 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 ZNF491Q8N8L2 437 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 RNASEH2CQ8TDP1 164 aaKnown RBP11.06□□□□□ -0.64
CLDN11-209ENST00000489485 UBE2E2Q96LR5 201 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 SLC25A32Q9H2D1 315 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 FNDC4Q9H6D8 234 aaPredicted RBP11.06□□□□□ -0.64
CLDN11-209ENST00000489485 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
CLDN11-209ENST00000489485 S4R3C0 116 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 MT-CO2P00403 227 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 NMBP08949 121 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 SLC38A11Q08AI6 406 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 LILRB2Q8N423 598 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 OR1S2Q8NGQ3 325 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 USMG5Q96IX5 58 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 CITED1Q99966 193 aa11.06□□□□□ -0.64
CLDN11-209ENST00000489485 NUDT19A8MXV4 375 aa11.05□□□□□ -0.64
CLDN11-209ENST00000489485 I3L2K1 104 aa11.05□□□□□ -0.64
CLDN11-209ENST00000489485 CD69Q07108 199 aa11.05□□□□□ -0.64
CLDN11-209ENST00000489485 KIAA0141Q14154 515 aaPredicted RBP11.05□□□□□ -0.64
CLDN11-209ENST00000489485 KCNRGQ8N5I3 272 aa11.05□□□□□ -0.64
CLDN11-209ENST00000489485 EIF4E3Q8N5X7 224 aaKnown RBP11.05□□□□□ -0.64
CLDN11-209ENST00000489485 KLHL30-AS1Q8NEE0 82 aa11.05□□□□□ -0.64
CLDN11-209ENST00000489485 MYOZ3Q8TDC0 251 aa11.05□□□□□ -0.64
CLDN11-209ENST00000489485 PCNPQ8WW12 178 aaKnown RBP11.05□□□□□ -0.64
CLDN11-209ENST00000489485 ZNF747Q9BV97 191 aa11.05□□□□□ -0.64
CLDN11-209ENST00000489485 FBXL17Q9UF56 701 aa11.05□□□□□ -0.64
CLDN11-209ENST00000489485 KANTRA0A1W2PQU2 76 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 SMCO3A2RU48 225 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 K7EIM0 57 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 IGHV3-23P01764 117 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 CDX1P47902 265 aaPredicted RBP11.04□□□□□ -0.64
CLDN11-209ENST00000489485 KLK9Q2XQG4 91 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 NSUN5P1Q3KNT7 163 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 ALKAL2Q6UX46 152 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 C18orf65Q6ZTR6 163 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 CXorf58Q96LI9 332 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 GNB4Q9HAV0 340 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 KLK9Q9UKQ9 250 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 GAMTQ14353 236 aa11.04□□□□□ -0.64
CLDN11-209ENST00000489485 SLC16A13Q7RTY0 426 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms