RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 APLNQ9ULZ1 77 aa8.68□□□□□ -1.02
SFXN3-207ENST00000489434 A0A1B0GU03 582 aa8.67□□□□□ -1.02
SFXN3-207ENST00000489434 INS-IGF2F8WCM5 200 aa8.67□□□□□ -1.02
SFXN3-207ENST00000489434 APOA1P02647 267 aa8.67□□□□□ -1.02
SFXN3-207ENST00000489434 OPRK1P41145 380 aa8.67□□□□□ -1.02
SFXN3-207ENST00000489434 P2RY1P47900 373 aa8.67□□□□□ -1.02
SFXN3-207ENST00000489434 HOXA1P49639 335 aaPredicted RBP8.67□□□□□ -1.02
SFXN3-207ENST00000489434 TRPT1Q86TN4 253 aaKnown RBP8.67□□□□□ -1.02
SFXN3-207ENST00000489434 SNX29P2Q8IUI4 249 aa8.67□□□□□ -1.02
SFXN3-207ENST00000489434 FAM24BQ8N5W8 94 aa8.67□□□□□ -1.02
SFXN3-207ENST00000489434 ZNF486Q96H40 463 aaPredicted RBP8.67□□□□□ -1.02
SFXN3-207ENST00000489434 TBC1D24Q9ULP9 559 aa8.67□□□□□ -1.02
SFXN3-207ENST00000489434 TRAV30A0A087WSZ9 112 aa8.66□□□□□ -1.02
SFXN3-207ENST00000489434 HELTA6NFD8 242 aa8.66□□□□□ -1.02
SFXN3-207ENST00000489434 K7EQG2 157 aa8.66□□□□□ -1.02
SFXN3-207ENST00000489434 CLN5O75503 358 aa8.66□□□□□ -1.02
SFXN3-207ENST00000489434 ZNF688P0C7X2 276 aa8.66□□□□□ -1.02
SFXN3-207ENST00000489434 RBMY1A1P0DJD3 496 aaKnown RBP8.66□□□□□ -1.02
SFXN3-207ENST00000489434 RBMY1CP0DJD4 496 aa8.66□□□□□ -1.02
SFXN3-207ENST00000489434 CRYBB3P26998 211 aa8.66□□□□□ -1.02
SFXN3-207ENST00000489434 RND3P61587 244 aa8.66□□□□□ -1.02
SFXN3-207ENST00000489434 NUTF2P61970 127 aaKnown RBP8.66□□□□□ -1.02
SFXN3-207ENST00000489434 RBMY1FQ15415 496 aaKnown RBP8.66□□□□□ -1.02
SFXN3-207ENST00000489434 ACTL10Q5JWF8 245 aa8.66□□□□□ -1.02
SFXN3-207ENST00000489434 RNASE11Q8TAA1 199 aaKnown RBP8.66□□□□□ -1.02
SFXN3-207ENST00000489434 RRNAD1Q96FB5 475 aaKnown RBP8.66□□□□□ -1.02
SFXN3-207ENST00000489434 RNF126Q9BV68 326 aa8.66□□□□□ -1.02
SFXN3-207ENST00000489434 COMMD3Q9UBI1 195 aa8.66□□□□□ -1.02
SFXN3-207ENST00000489434 IGHV4-4A0A075B6R2 117 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 A0A0B4J293 547 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 RPS10-NUDT3A0A1W2PQS6 291 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 KNCNA6PVL3 124 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 ZNF705EA8MWA4 302 aaPredicted RBP8.65□□□□□ -1.02
SFXN3-207ENST00000489434 IGKV1-5P01602 117 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 GIG44P09565 113 aaPredicted RBP8.65□□□□□ -1.02
SFXN3-207ENST00000489434 RNASE2P10153 161 aaKnown RBP8.65□□□□□ -1.02
SFXN3-207ENST00000489434 TGFBR1P36897 503 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 ETV6P41212 452 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 RPL5P46777 297 aaKnown RBP8.65□□□□□ -1.02
SFXN3-207ENST00000489434 AP2S1P53680 142 aaPredicted RBP8.65□□□□□ -1.02
SFXN3-207ENST00000489434 PIGPP57054 158 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 LSM3P62310 102 aaKnown RBP8.65□□□□□ -1.02
SFXN3-207ENST00000489434 IZUMO4Q1ZYL8 232 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 TRIM16LQ309B1 348 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 RNASE10Q5GAN6 216 aaKnown RBP8.65□□□□□ -1.02
SFXN3-207ENST00000489434 PVRIGQ6DKI7 326 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 Q6ZTC4 211 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 OR4X1Q8NH49 305 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 C1QTNF4Q9BXJ3 329 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 COPZ2Q9P299 210 aa8.65□□□□□ -1.02
SFXN3-207ENST00000489434 C3orf85A0A1B0GTC6 90 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 M0QYG6 137 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 P0DMU3 169 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 FAM231AP0DMU4 169 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 FAM231CP0DMU5 169 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 PI3P19957 117 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 NPY1RP25929 384 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 PPP5CP53041 499 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 SNRPD3P62318 126 aaKnown RBP8.64□□□□□ -1.03
SFXN3-207ENST00000489434 DHRS2Q13268 280 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 CCDC71LQ8N9Z2 235 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 ZFAND1Q8TCF1 268 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 PCLOQ9Y6V0 5065 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
SFXN3-207ENST00000489434 DEFB131BA0A096LNP1 70 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 B3GALNT1O75752 331 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 P0C879 139 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 TBPP20226 339 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 C4BPBP20851 252 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 HTR2BP41595 481 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 PSMG4Q5JS54 123 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 ARRDC1Q8N5I2 433 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 OR1S2Q8NGQ3 325 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 DCANP1Q8TF63 244 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 Q8WTZ3 238 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 RAB40CQ96S21 281 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 TP53RKQ96S44 253 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 CLEC5AQ9NY25 188 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 X6R8D5 127 aa8.63□□□□□ -1.03
SFXN3-207ENST00000489434 ELOA3CA0A087WX78 387 aaPredicted RBP8.62□□□□□ -1.03
SFXN3-207ENST00000489434 IGKV1-17P01599 117 aa8.62□□□□□ -1.03
SFXN3-207ENST00000489434 AMBPP02760 352 aa8.62□□□□□ -1.03
SFXN3-207ENST00000489434 SPCS3P61009 180 aa8.62□□□□□ -1.03
SFXN3-207ENST00000489434 TIGITQ495A1 244 aa8.62□□□□□ -1.03
SFXN3-207ENST00000489434 MZT2AQ6P582 158 aa8.62□□□□□ -1.03
SFXN3-207ENST00000489434 POM121L12Q8N7R1 296 aa8.62□□□□□ -1.03
SFXN3-207ENST00000489434 YIPF6Q96EC8 236 aa8.62□□□□□ -1.03
SFXN3-207ENST00000489434 NDUFAF3Q9BU61 184 aa8.62□□□□□ -1.03
SFXN3-207ENST00000489434 FNDC4Q9H6D8 234 aaPredicted RBP8.62□□□□□ -1.03
SFXN3-207ENST00000489434 HEYLQ9NQ87 328 aaPredicted RBP8.62□□□□□ -1.03
SFXN3-207ENST00000489434 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.62□□□□□ -1.03
SFXN3-207ENST00000489434 A0A087WXM4 84 aa8.61□□□□□ -1.03
SFXN3-207ENST00000489434 FAM25AB3EWG3 89 aa8.61□□□□□ -1.03
SFXN3-207ENST00000489434 FAM25CB3EWG5 89 aa8.61□□□□□ -1.03
SFXN3-207ENST00000489434 FAM25GB3EWG6 89 aa8.61□□□□□ -1.03
SFXN3-207ENST00000489434 GSTZ1O43708 216 aaPredicted RBP8.61□□□□□ -1.03
SFXN3-207ENST00000489434 HPGDSO60760 199 aa8.61□□□□□ -1.03
SFXN3-207ENST00000489434 HNRNPCP07910 306 aaKnown RBP eCLIP8.61□□□□□ -1.03
SFXN3-207ENST00000489434 SLC25A4P12235 298 aa8.61□□□□□ -1.03
SFXN3-207ENST00000489434 ELK1P19419 428 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms