RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 GRAMD2BQ96HH9 432 aa6.82□□□□□ -1.32
SNX17-207ENST00000489402 ZFAND3Q9H8U3 227 aa6.82□□□□□ -1.32
SNX17-207ENST00000489402 SCPEP1Q9HB40 452 aa6.82□□□□□ -1.32
SNX17-207ENST00000489402 ENY2Q9NPA8 101 aa6.82□□□□□ -1.32
SNX17-207ENST00000489402 APLNQ9ULZ1 77 aa6.82□□□□□ -1.32
SNX17-207ENST00000489402 TRAV10A0A0B4J240 114 aa6.81□□□□□ -1.32
SNX17-207ENST00000489402 IGHV4-28A0A0C4DH34 117 aa6.81□□□□□ -1.32
SNX17-207ENST00000489402 TMEM50AO95807 157 aa6.81□□□□□ -1.32
SNX17-207ENST00000489402 IFNA17P01571 189 aa6.81□□□□□ -1.32
SNX17-207ENST00000489402 PGAM2P15259 253 aa6.81□□□□□ -1.32
SNX17-207ENST00000489402 RPS19P39019 145 aaKnown RBP6.81□□□□□ -1.32
SNX17-207ENST00000489402 HOXA1P49639 335 aaPredicted RBP6.81□□□□□ -1.32
SNX17-207ENST00000489402 KCTD21Q4G0X4 260 aa6.81□□□□□ -1.32
SNX17-207ENST00000489402 TRPT1Q86TN4 253 aaKnown RBP6.81□□□□□ -1.32
SNX17-207ENST00000489402 TMEM230Q96A57 120 aa6.81□□□□□ -1.32
SNX17-207ENST00000489402 VCX3AQ9NNX9 186 aa6.81□□□□□ -1.32
SNX17-207ENST00000489402 IGHV4-4A0A075B6R2 117 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 A0A1B0GU03 582 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 INS-IGF2F8WCM5 200 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 K7EQG2 157 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 ZNF688P0C7X2 276 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 RBMY1A1P0DJD3 496 aaKnown RBP6.8□□□□□ -1.32
SNX17-207ENST00000489402 RBMY1CP0DJD4 496 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 CRYBB3P26998 211 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 HLA-DMBP28068 263 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 OPRK1P41145 380 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 P2RY1P47900 373 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 LSM3P62310 102 aaKnown RBP6.8□□□□□ -1.32
SNX17-207ENST00000489402 RBMY1FQ15415 496 aaKnown RBP6.8□□□□□ -1.32
SNX17-207ENST00000489402 IZUMO4Q1ZYL8 232 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 LINC00336Q6ZUF6 198 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 SNX29P2Q8IUI4 249 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 RNASE11Q8TAA1 199 aaKnown RBP6.8□□□□□ -1.32
SNX17-207ENST00000489402 ZNF486Q96H40 463 aaPredicted RBP6.8□□□□□ -1.32
SNX17-207ENST00000489402 BATF3Q9NR55 127 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 COMMD3Q9UBI1 195 aa6.8□□□□□ -1.32
SNX17-207ENST00000489402 TRAV30A0A087WSZ9 112 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 RPS10-NUDT3A0A1W2PQS6 291 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 HELTA6NFD8 242 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 KNCNA6PVL3 124 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 ZNF705EA8MWA4 302 aaPredicted RBP6.79□□□□□ -1.32
SNX17-207ENST00000489402 M0QYG6 137 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 CLN5O75503 358 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 IGKV1-5P01602 117 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 APOA1P02647 267 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 RNASE2P10153 161 aaKnown RBP6.79□□□□□ -1.32
SNX17-207ENST00000489402 C4BPBP20851 252 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 PIGPP57054 158 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 RND3P61587 244 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 NUTF2P61970 127 aaKnown RBP6.79□□□□□ -1.32
SNX17-207ENST00000489402 TRIM16LQ309B1 348 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 ACTL10Q5JWF8 245 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 Q6ZTC4 211 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 OR4X1Q8NH49 305 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 RRNAD1Q96FB5 475 aaKnown RBP6.79□□□□□ -1.32
SNX17-207ENST00000489402 RNF126Q9BV68 326 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 TBC1D24Q9ULP9 559 aa6.79□□□□□ -1.32
SNX17-207ENST00000489402 A0A0B4J293 547 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 C3orf85A0A1B0GTC6 90 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 GIG44P09565 113 aaPredicted RBP6.78□□□□□ -1.32
SNX17-207ENST00000489402 PI3P19957 117 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 ETV6P41212 452 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 RPL5P46777 297 aaKnown RBP6.78□□□□□ -1.32
SNX17-207ENST00000489402 PPP5CP53041 499 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 AP2S1P53680 142 aaPredicted RBP6.78□□□□□ -1.32
SNX17-207ENST00000489402 DHRS2Q13268 280 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 RNASE10Q5GAN6 216 aaKnown RBP6.78□□□□□ -1.32
SNX17-207ENST00000489402 PVRIGQ6DKI7 326 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 ARRDC1Q8N5I2 433 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 CCDC71LQ8N9Z2 235 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 DCANP1Q8TF63 244 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 YIPF6Q96EC8 236 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 TP53RKQ96S44 253 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 C1QTNF4Q9BXJ3 329 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 FNDC4Q9H6D8 234 aaPredicted RBP6.78□□□□□ -1.32
SNX17-207ENST00000489402 MRPL36Q9P0J6 103 aaKnown RBP6.78□□□□□ -1.32
SNX17-207ENST00000489402 COPZ2Q9P299 210 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 X6R8D5 127 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 DNAH11Q96DT5 4516 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 AGRNO00468 2067 aa6.78□□□□□ -1.32
SNX17-207ENST00000489402 ABCA13Q86UQ4 5058 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 ELOA3CA0A087WX78 387 aaPredicted RBP6.77□□□□□ -1.33
SNX17-207ENST00000489402 A0A087WXM4 84 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 A6NHS1 94 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 FAM25AB3EWG3 89 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 FAM25CB3EWG5 89 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 FAM25GB3EWG6 89 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 B3GALNT1O75752 331 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 AMBPP02760 352 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 HNRNPCP07910 306 aaKnown RBP eCLIP6.77□□□□□ -1.33
SNX17-207ENST00000489402 P0C879 139 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 P0DMU3 169 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 FAM231AP0DMU4 169 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 FAM231CP0DMU5 169 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 SNRPD3P62318 126 aaKnown RBP6.77□□□□□ -1.33
SNX17-207ENST00000489402 MLANAQ16655 118 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 TIGITQ495A1 244 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 C4orf48Q5BLP8 95 aa6.77□□□□□ -1.33
SNX17-207ENST00000489402 RNASE12Q5GAN4 147 aaKnown RBP6.77□□□□□ -1.33
SNX17-207ENST00000489402 PSMG4Q5JS54 123 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms