RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 BMI1P35226 326 aa18.05■□□□□ 0.48
PTPN18-213ENST00000489215 OPRK1P41145 380 aa18.05■□□□□ 0.48
PTPN18-213ENST00000489215 SMCO1Q147U7 214 aa18.05■□□□□ 0.48
PTPN18-213ENST00000489215 RBMS2Q15434 407 aaKnown RBP18.05■□□□□ 0.48
PTPN18-213ENST00000489215 OR10C1Q96KK4 312 aa18.05■□□□□ 0.48
PTPN18-213ENST00000489215 SPAG8Q99932 426 aaPredicted RBP18.05■□□□□ 0.48
PTPN18-213ENST00000489215 TRAV30A0A087WSZ9 112 aa18.04■□□□□ 0.48
PTPN18-213ENST00000489215 CD7P09564 240 aa18.04■□□□□ 0.48
PTPN18-213ENST00000489215 C2orf83Q53S99 150 aa18.04■□□□□ 0.48
PTPN18-213ENST00000489215 RNASEH2CQ8TDP1 164 aaKnown RBP18.04■□□□□ 0.48
PTPN18-213ENST00000489215 TRAV14DV4A0A0A6YYC5 116 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 A0A1B0GU03 582 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 CENPXA8MT69 81 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 TSPAN4O14817 238 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 SCAF4O95104 1147 aaKnown RBP18.03■□□□□ 0.48
PTPN18-213ENST00000489215 TMEM50AO95807 157 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 CD5P06127 495 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 ATP5IP56385 69 aaPredicted RBP18.03■□□□□ 0.48
PTPN18-213ENST00000489215 UBE2MP61081 183 aaKnown RBP18.03■□□□□ 0.48
PTPN18-213ENST00000489215 NMSQ5H8A3 153 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 ETFRF1Q6IPR1 90 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 ZNF600Q6ZNG1 722 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 OR4X1Q8NH49 305 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 SPATA25Q9BR10 227 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 SMPXQ9UHP9 88 aa18.03■□□□□ 0.48
PTPN18-213ENST00000489215 IGHV3-48P01763 117 aa18.02■□□□□ 0.48
PTPN18-213ENST00000489215 VAMP1P23763 118 aa18.02■□□□□ 0.48
PTPN18-213ENST00000489215 LYZL2Q7Z4W2 148 aa18.02■□□□□ 0.48
PTPN18-213ENST00000489215 CENPSQ8N2Z9 138 aa18.02■□□□□ 0.48
PTPN18-213ENST00000489215 LRTM2Q8N967 370 aa18.02■□□□□ 0.48
PTPN18-213ENST00000489215 SLC24A4Q8NFF2 622 aa18.02■□□□□ 0.48
PTPN18-213ENST00000489215 U3KQ87 197 aa18.02■□□□□ 0.48
PTPN18-213ENST00000489215 DNAH9Q9NYC9 4486 aa18.01■□□□□ 0.47
PTPN18-213ENST00000489215 CLN5O75503 358 aa18.01■□□□□ 0.47
PTPN18-213ENST00000489215 SLC25A4P12235 298 aa18.01■□□□□ 0.47
PTPN18-213ENST00000489215 TNFRSF9Q07011 255 aa18.01■□□□□ 0.47
PTPN18-213ENST00000489215 HAGHQ16775 308 aa18.01■□□□□ 0.47
PTPN18-213ENST00000489215 TMEM116Q8NCL8 245 aa18.01■□□□□ 0.47
PTPN18-213ENST00000489215 C7orf50Q9BRJ6 194 aaKnown RBP18.01■□□□□ 0.47
PTPN18-213ENST00000489215 HSPB7Q9UBY9 170 aa18.01■□□□□ 0.47
PTPN18-213ENST00000489215 IGHV7-4-1A0A0J9YVY3 117 aa18■□□□□ 0.47
PTPN18-213ENST00000489215 SLC25A6P12236 298 aa18■□□□□ 0.47
PTPN18-213ENST00000489215 CNPY1Q3B7I2 92 aa18■□□□□ 0.47
PTPN18-213ENST00000489215 LINC00322Q6ZN03 302 aaPredicted RBP18■□□□□ 0.47
PTPN18-213ENST00000489215 DEFB125Q8N687 156 aa18■□□□□ 0.47
PTPN18-213ENST00000489215 OR1S1Q8NH92 325 aa18■□□□□ 0.47
PTPN18-213ENST00000489215 SRD5A3Q9H8P0 318 aa18■□□□□ 0.47
PTPN18-213ENST00000489215 PRR13Q9NZ81 148 aa18■□□□□ 0.47
PTPN18-213ENST00000489215 TMED3Q9Y3Q3 217 aa18■□□□□ 0.47
PTPN18-213ENST00000489215 OR4C46A6NHA9 309 aa17.99■□□□□ 0.47
PTPN18-213ENST00000489215 SFT2D2O95562 160 aa17.99■□□□□ 0.47
PTPN18-213ENST00000489215 CMC4P56277 68 aaPredicted RBP17.99■□□□□ 0.47
PTPN18-213ENST00000489215 BAK1Q16611 211 aa17.99■□□□□ 0.47
PTPN18-213ENST00000489215 RHPN1-AS1Q9BWJ2 59 aa17.99■□□□□ 0.47
PTPN18-213ENST00000489215 FNDC4Q9H6D8 234 aaPredicted RBP17.99■□□□□ 0.47
PTPN18-213ENST00000489215 IGHV3OR16-8A0A075B7F1 116 aa17.98■□□□□ 0.47
PTPN18-213ENST00000489215 CHEK1O14757 476 aa17.98■□□□□ 0.47
PTPN18-213ENST00000489215 ZNF207O43670 478 aaKnown RBP17.98■□□□□ 0.47
PTPN18-213ENST00000489215 NPY1RP25929 384 aa17.98■□□□□ 0.47
PTPN18-213ENST00000489215 TOMM20LQ6UXN7 152 aa17.98■□□□□ 0.47
PTPN18-213ENST00000489215 DTD1Q8TEA8 209 aa17.98■□□□□ 0.47
PTPN18-213ENST00000489215 FAM110AQ9BQ89 295 aa17.98■□□□□ 0.47
PTPN18-213ENST00000489215 TMEM231Q9H6L2 316 aa17.98■□□□□ 0.47
PTPN18-213ENST00000489215 IFNA10P01566 189 aa17.97■□□□□ 0.47
PTPN18-213ENST00000489215 PUS1Q9Y606 427 aaKnown RBP eCLIP17.97■□□□□ 0.47
PTPN18-213ENST00000489215 SELENOKQ9Y6D0 94 aa17.97■□□□□ 0.47
PTPN18-213ENST00000489215 A0A1W2PS18 150 aa17.96■□□□□ 0.47
PTPN18-213ENST00000489215 FAM90A26D6RGX4 464 aa17.96■□□□□ 0.47
PTPN18-213ENST00000489215 MED6O75586 246 aa17.96■□□□□ 0.47
PTPN18-213ENST00000489215 NDUFB6O95139 128 aa17.96■□□□□ 0.47
PTPN18-213ENST00000489215 PAFAH1B2P68402 229 aa17.96■□□□□ 0.47
PTPN18-213ENST00000489215 C3orf84H3BNL1 204 aa17.95■□□□□ 0.46
PTPN18-213ENST00000489215 PPP1R1AQ13522 171 aa17.95■□□□□ 0.46
PTPN18-213ENST00000489215 MLANAQ16655 118 aa17.95■□□□□ 0.46
PTPN18-213ENST00000489215 LINC00299Q6ZSB3 139 aa17.95■□□□□ 0.46
PTPN18-213ENST00000489215 OR1S2Q8NGQ3 325 aa17.95■□□□□ 0.46
PTPN18-213ENST00000489215 NARS2Q96I59 477 aaKnown RBP17.95■□□□□ 0.46
PTPN18-213ENST00000489215 ZNF414Q96IQ9 312 aa17.95■□□□□ 0.46
PTPN18-213ENST00000489215 RBKSQ9H477 322 aa17.95■□□□□ 0.46
PTPN18-213ENST00000489215 PITX3O75364 302 aa17.94■□□□□ 0.46
PTPN18-213ENST00000489215 NXPH3O95157 252 aa17.94■□□□□ 0.46
PTPN18-213ENST00000489215 NPPCP23582 126 aa17.94■□□□□ 0.46
PTPN18-213ENST00000489215 CITED4Q96RK1 184 aa17.94■□□□□ 0.46
PTPN18-213ENST00000489215 RNF2Q99496 336 aa17.94■□□□□ 0.46
PTPN18-213ENST00000489215 LOC102724200A0A096LPH7 203 aaPredicted RBP17.93■□□□□ 0.46
PTPN18-213ENST00000489215 RBMY1BA6NDE4 496 aaKnown RBP17.93■□□□□ 0.46
PTPN18-213ENST00000489215 RBMY1EA6NEQ0 496 aaKnown RBP17.93■□□□□ 0.46
PTPN18-213ENST00000489215 RBMY1DP0C7P1 496 aaKnown RBP17.93■□□□□ 0.46
PTPN18-213ENST00000489215 IL7P13232 177 aa17.93■□□□□ 0.46
PTPN18-213ENST00000489215 YPEL3P61236 119 aaPredicted RBP17.93■□□□□ 0.46
PTPN18-213ENST00000489215 PRSS54Q6PEW0 395 aa17.93■□□□□ 0.46
PTPN18-213ENST00000489215 Q8WTZ3 238 aa17.93■□□□□ 0.46
PTPN18-213ENST00000489215 CIB3Q96Q77 187 aaPredicted RBP17.93■□□□□ 0.46
PTPN18-213ENST00000489215 METTL26Q96S19 204 aa17.93■□□□□ 0.46
PTPN18-213ENST00000489215 SDHCQ99643 169 aaPredicted RBP17.93■□□□□ 0.46
PTPN18-213ENST00000489215 WFDC10AQ9H1F0 79 aa17.93■□□□□ 0.46
PTPN18-213ENST00000489215 VSIRQ9H7M9 311 aa17.93■□□□□ 0.46
PTPN18-213ENST00000489215 ZFAND3Q9H8U3 227 aa17.93■□□□□ 0.46
PTPN18-213ENST00000489215 RND2P52198 227 aa17.92■□□□□ 0.46
PTPN18-213ENST00000489215 RPP30P78346 268 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms