RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 GINS3Q9BRX5 216 aa11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 MRPS26Q9BYN8 205 aaKnown RBP11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 SCPEP1Q9HB40 452 aa11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 CLEC5AQ9NY25 188 aa11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 IGLL5B9A064 214 aa11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 IFNA4P05014 189 aa11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 ZNF688P0C7X2 276 aa11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 P0C879 139 aa11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 RBMY1A1P0DJD3 496 aaKnown RBP11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 RBMY1CP0DJD4 496 aa11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 HOXA1P49639 335 aaPredicted RBP11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 CMC4P56277 68 aaPredicted RBP11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 RBMY1FQ15415 496 aaKnown RBP11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 TRIM16LQ309B1 348 aa11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 GSG1LQ6UXU4 331 aa11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 FAM212BQ9NTI7 297 aaPredicted RBP11.57□□□□□ -0.56
ERGIC3-217ENST00000488935 C3orf85A0A1B0GTC6 90 aa11.56□□□□□ -0.56
ERGIC3-217ENST00000488935 NXPH3O95157 252 aa11.56□□□□□ -0.56
ERGIC3-217ENST00000488935 C4BPBP20851 252 aa11.56□□□□□ -0.56
ERGIC3-217ENST00000488935 NPPCP23582 126 aa11.56□□□□□ -0.56
ERGIC3-217ENST00000488935 SCGB2B2Q4G0G5 96 aa11.56□□□□□ -0.56
ERGIC3-217ENST00000488935 FAAP20Q6NZ36 180 aa11.56□□□□□ -0.56
ERGIC3-217ENST00000488935 ZNF767PQ75MW2 155 aa11.56□□□□□ -0.56
ERGIC3-217ENST00000488935 LHFPL1Q86WI0 220 aa11.56□□□□□ -0.56
ERGIC3-217ENST00000488935 STHQ8IWL8 128 aa11.56□□□□□ -0.56
ERGIC3-217ENST00000488935 IGHV4-28A0A0C4DH34 117 aa11.55□□□□□ -0.56
ERGIC3-217ENST00000488935 OPRK1P41145 380 aa11.55□□□□□ -0.56
ERGIC3-217ENST00000488935 RND3P61587 244 aa11.55□□□□□ -0.56
ERGIC3-217ENST00000488935 RNASE10Q5GAN6 216 aaKnown RBP11.55□□□□□ -0.56
ERGIC3-217ENST00000488935 Q8NAQ8 132 aa11.55□□□□□ -0.56
ERGIC3-217ENST00000488935 MARCH1Q8TCQ1 289 aa11.55□□□□□ -0.56
ERGIC3-217ENST00000488935 C2CD4CQ8TF44 421 aa11.55□□□□□ -0.56
ERGIC3-217ENST00000488935 TMEM230Q96A57 120 aa11.55□□□□□ -0.56
ERGIC3-217ENST00000488935 ABHD1Q96SE0 405 aa11.55□□□□□ -0.56
ERGIC3-217ENST00000488935 C11orf68Q9H3H3 251 aaKnown RBP11.55□□□□□ -0.56
ERGIC3-217ENST00000488935 EXTL2Q9UBQ6 330 aa11.55□□□□□ -0.56
ERGIC3-217ENST00000488935 K7EQG2 157 aa11.54□□□□□ -0.56
ERGIC3-217ENST00000488935 CLN5O75503 358 aa11.54□□□□□ -0.56
ERGIC3-217ENST00000488935 P2RY1P47900 373 aa11.54□□□□□ -0.56
ERGIC3-217ENST00000488935 ACTL10Q5JWF8 245 aa11.54□□□□□ -0.56
ERGIC3-217ENST00000488935 OR13C8Q8NGS7 320 aa11.54□□□□□ -0.56
ERGIC3-217ENST00000488935 RNASE11Q8TAA1 199 aaKnown RBP11.54□□□□□ -0.56
ERGIC3-217ENST00000488935 LHFPL5Q8TAF8 219 aa11.54□□□□□ -0.56
ERGIC3-217ENST00000488935 PDCD10Q9BUL8 212 aa11.54□□□□□ -0.56
ERGIC3-217ENST00000488935 MFFQ9GZY8 342 aa11.54□□□□□ -0.56
ERGIC3-217ENST00000488935 COPZ2Q9P299 210 aa11.54□□□□□ -0.56
ERGIC3-217ENST00000488935 APLNQ9ULZ1 77 aa11.54□□□□□ -0.56
ERGIC3-217ENST00000488935 ELOA3CA0A087WX78 387 aaPredicted RBP11.53□□□□□ -0.56
ERGIC3-217ENST00000488935 IGKV1-17P01599 117 aa11.53□□□□□ -0.56
ERGIC3-217ENST00000488935 HLA-DMBP28068 263 aa11.53□□□□□ -0.56
ERGIC3-217ENST00000488935 RORCP51449 518 aa11.53□□□□□ -0.56
ERGIC3-217ENST00000488935 MEF2DQ14814 521 aa11.53□□□□□ -0.56
ERGIC3-217ENST00000488935 PVRIGQ6DKI7 326 aa11.53□□□□□ -0.56
ERGIC3-217ENST00000488935 TRPT1Q86TN4 253 aaKnown RBP11.53□□□□□ -0.56
ERGIC3-217ENST00000488935 METTL26Q96S19 204 aa11.53□□□□□ -0.56
ERGIC3-217ENST00000488935 SCRT1Q9BWW7 348 aa11.53□□□□□ -0.56
ERGIC3-217ENST00000488935 ENY2Q9NPA8 101 aa11.53□□□□□ -0.56
ERGIC3-217ENST00000488935 PRR13Q9NZ81 148 aa11.53□□□□□ -0.56
ERGIC3-217ENST00000488935 OR5AC1P0C628 307 aa11.52□□□□□ -0.57
ERGIC3-217ENST00000488935 CRYBB3P26998 211 aa11.52□□□□□ -0.57
ERGIC3-217ENST00000488935 Q6ZTC4 211 aa11.52□□□□□ -0.57
ERGIC3-217ENST00000488935 OR4X1Q8NH49 305 aa11.52□□□□□ -0.57
ERGIC3-217ENST00000488935 MTFP1Q9UDX5 166 aa11.52□□□□□ -0.57
ERGIC3-217ENST00000488935 X6R8D5 127 aa11.52□□□□□ -0.57
ERGIC3-217ENST00000488935 DNAH2Q9P225 4427 aa11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 RAB3DO95716 219 aa11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 ALDH3B2P48448 385 aa11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 SUB1P53999 127 aaKnown RBP eCLIP11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 DEFB1P60022 68 aa11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 DHRS2Q13268 280 aa11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 TERB2Q8NHR7 220 aa11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 DCANP1Q8TF63 244 aa11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 TMEM170AQ8WVE7 144 aa11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 GPR146Q96CH1 333 aa11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 RRNAD1Q96FB5 475 aaKnown RBP11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 ZNF486Q96H40 463 aaPredicted RBP11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 TMEM231Q9H6L2 316 aa11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 CELA1Q9UNI1 258 aa11.51□□□□□ -0.57
ERGIC3-217ENST00000488935 FAT2Q9NYQ8 4349 aa11.5□□□□□ -0.57
ERGIC3-217ENST00000488935 KIAA1109Q2LD37 5005 aa11.5□□□□□ -0.57
ERGIC3-217ENST00000488935 INS-IGF2F8WCM5 200 aa11.5□□□□□ -0.57
ERGIC3-217ENST00000488935 UCP1P25874 307 aa11.5□□□□□ -0.57
ERGIC3-217ENST00000488935 RND2P52198 227 aa11.5□□□□□ -0.57
ERGIC3-217ENST00000488935 PSMG4Q5JS54 123 aa11.5□□□□□ -0.57
ERGIC3-217ENST00000488935 MZT2AQ6P582 158 aa11.5□□□□□ -0.57
ERGIC3-217ENST00000488935 SELENOHQ8IZQ5 122 aaKnown RBP11.5□□□□□ -0.57
ERGIC3-217ENST00000488935 RTBDNQ9BSG5 229 aaPredicted RBP11.5□□□□□ -0.57
ERGIC3-217ENST00000488935 MIXL1Q9H2W2 232 aa11.5□□□□□ -0.57
ERGIC3-217ENST00000488935 HEYLQ9NQ87 328 aaPredicted RBP11.5□□□□□ -0.57
ERGIC3-217ENST00000488935 TRAV2A0A0B4J234 112 aa11.49□□□□□ -0.57
ERGIC3-217ENST00000488935 A0A1W2PS18 150 aa11.49□□□□□ -0.57
ERGIC3-217ENST00000488935 CD5P06127 495 aa11.49□□□□□ -0.57
ERGIC3-217ENST00000488935 RPL5P46777 297 aaKnown RBP11.49□□□□□ -0.57
ERGIC3-217ENST00000488935 DHODHQ02127 395 aa11.49□□□□□ -0.57
ERGIC3-217ENST00000488935 CTF1Q16619 201 aa11.49□□□□□ -0.57
ERGIC3-217ENST00000488935 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
ERGIC3-217ENST00000488935 GPR107Q5VW38 600 aa11.49□□□□□ -0.57
ERGIC3-217ENST00000488935 STEAP1BQ6NZ63 245 aa11.49□□□□□ -0.57
ERGIC3-217ENST00000488935 PRSS54Q6PEW0 395 aa11.49□□□□□ -0.57
ERGIC3-217ENST00000488935 GPR141Q7Z602 305 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms