RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 IFT46Q9NQC8 304 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 DIABLOQ9NR28 239 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 FAM212BQ9NTI7 297 aaPredicted RBP4.66□□□□□ -1.66
PTCH1-211ENST00000488809 NDUFB11Q9NX14 153 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 EHFQ9NZC4 300 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 BLOC1S6Q9UL45 172 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 RFNGQ9Y644 331 aa4.66□□□□□ -1.66
PTCH1-211ENST00000488809 TRAV18A0A075B6X5 111 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 TRAV30A0A087WSZ9 112 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 GPR31O00270 319 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 TMEM50AO95807 157 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 PTHLHP12272 177 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 CRYBB3P26998 211 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 EMP1P54849 157 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 OXA1LQ15070 435 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 LPCAT3Q6P1A2 487 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 C6orf223Q8N319 242 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 DCANP1Q8TF63 244 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 RAB40CQ96S21 281 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 ZNF2Q9BSG1 426 aaPredicted RBP4.65□□□□□ -1.67
PTCH1-211ENST00000488809 SCRT2Q9NQ03 307 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 XCL2Q9UBD3 114 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 LRP1BQ9NZR2 4599 aa4.65□□□□□ -1.67
PTCH1-211ENST00000488809 SMIM30A4D0T7 59 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 EBAG9O00559 213 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 GSTZ1O43708 216 aaPredicted RBP4.64□□□□□ -1.67
PTCH1-211ENST00000488809 CLN5O75503 358 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 ATG12O94817 140 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 HNRNPCP07910 306 aaKnown RBP eCLIP4.64□□□□□ -1.67
PTCH1-211ENST00000488809 HTN3P15516 51 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 OPRK1P41145 380 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 TAS2R46P59540 309 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 HSPE1P61604 102 aaKnown RBP4.64□□□□□ -1.67
PTCH1-211ENST00000488809 TNP2Q05952 138 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 FAM222AQ5U5X8 452 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 SFXN4Q6P4A7 337 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 GSG1LQ6UXU4 331 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 ZNF705AQ6ZN79 300 aaPredicted RBP4.64□□□□□ -1.67
PTCH1-211ENST00000488809 SLC35G3Q8N808 338 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 OR5H2Q8NGV7 314 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 OR6F1Q8NGZ6 308 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 SCRT1Q9BWW7 348 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 ENY2Q9NPA8 101 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 DKK2Q9UBU2 259 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 RRP15Q9Y3B9 282 aaKnown RBP4.64□□□□□ -1.67
PTCH1-211ENST00000488809 GOLT1BQ9Y3E0 138 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 HERC1Q15751 4861 aa4.64□□□□□ -1.67
PTCH1-211ENST00000488809 DNAH5Q8TE73 4624 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 IGHV3OR16-12A0A075B7B8 117 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 NBDYA0A0U1RRE5 68 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 A0A1B0GU03 582 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 RPS10-NUDT3A0A1W2PQS6 291 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 DBX1A6NMT0 343 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 ZNF705FA8MVS1 300 aaPredicted RBP4.63□□□□□ -1.67
PTCH1-211ENST00000488809 INS-IGF2F8WCM5 200 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 H3BMM0 161 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 TMEM127O75204 238 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 HBE1P02100 147 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 FCER2P06734 321 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 ZNF705DP0CH99 300 aaPredicted RBP4.63□□□□□ -1.67
PTCH1-211ENST00000488809 ZNF705BP0CI00 300 aaPredicted RBP4.63□□□□□ -1.67
PTCH1-211ENST00000488809 HLA-DRB4P13762 266 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 NUP62P37198 522 aaPredicted RBP4.63□□□□□ -1.67
PTCH1-211ENST00000488809 NKX2-1P43699 371 aaPredicted RBP4.63□□□□□ -1.67
PTCH1-211ENST00000488809 ALDH3B2P48448 385 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 DAD1P61803 113 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 TMEM88Q6PEY1 159 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 DHRS11Q6UWP2 260 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 OR4X1Q8NH49 305 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 Q8WTZ3 238 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 SEC22AQ96IW7 307 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 C7orf50Q9BRJ6 194 aaKnown RBP4.63□□□□□ -1.67
PTCH1-211ENST00000488809 YTHDF1Q9BYJ9 559 aaKnown RBP4.63□□□□□ -1.67
PTCH1-211ENST00000488809 AUNIPQ9H7T9 357 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 NRN1Q9NPD7 142 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 TXNL4BQ9NX01 149 aaKnown RBP4.63□□□□□ -1.67
PTCH1-211ENST00000488809 PFDN2Q9UHV9 154 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 SSR3Q9UNL2 185 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 HLA-DRB4X5D2U9 266 aa4.63□□□□□ -1.67
PTCH1-211ENST00000488809 EPM2AB3EWF7 344 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 FAM90A26D6RGX4 464 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 RPL5P46777 297 aaKnown RBP4.62□□□□□ -1.67
PTCH1-211ENST00000488809 RFX2P48378 723 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 HSPA13P48723 471 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 AKR1C2P52895 323 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 PPP5CP53041 499 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 CCL18P55774 89 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 TSPAN5P62079 268 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 RRN3P1Q2M238 152 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 PHLDA2Q53GA4 152 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 SPATA31B1PQ5VZV4 182 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 C16orf54Q6UWD8 224 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 SIGLEC15Q6ZMC9 328 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 SPATA12Q7Z6I5 190 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 TBC1D26Q86UD7 250 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 OR1S2Q8NGQ3 325 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 GLMPQ8WWB7 406 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 MRGPRFQ96AM1 343 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 FXYD6Q9H0Q3 95 aa4.62□□□□□ -1.67
PTCH1-211ENST00000488809 PTTG2Q9NZH5 202 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms