RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 COMMD5Q9GZQ3 224 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 BET1LQ9NYM9 111 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 SPTBN1Q01082 2364 aaKnown RBP10.25□□□□□ -0.77
CLIC4-202ENST00000488683 CHD8Q9HCK8 2581 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 SNURFLB1AK76 121 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 C16orf97H3BN30 126 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 EREGO14944 169 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 SERF1AO75920 110 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 GNG4P50150 75 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 PRR27Q6MZM9 219 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 MMD2Q8IY49 270 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 KIR3DL3Q8N743 410 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 ZNF714Q96N38 554 aa10.25□□□□□ -0.77
CLIC4-202ENST00000488683 ZNF705FA8MVS1 300 aaPredicted RBP10.24□□□□□ -0.77
CLIC4-202ENST00000488683 ZNF705DP0CH99 300 aaPredicted RBP10.24□□□□□ -0.77
CLIC4-202ENST00000488683 ZNF705BP0CI00 300 aaPredicted RBP10.24□□□□□ -0.77
CLIC4-202ENST00000488683 TDGF1P3P51864 188 aa10.24□□□□□ -0.77
CLIC4-202ENST00000488683 C2orf83Q53S99 150 aa10.24□□□□□ -0.77
CLIC4-202ENST00000488683 BLNKQ8WV28 456 aa10.24□□□□□ -0.77
CLIC4-202ENST00000488683 ZNF430Q9H8G1 570 aaPredicted RBP10.24□□□□□ -0.77
CLIC4-202ENST00000488683 V9GYV3 84 aa10.24□□□□□ -0.77
CLIC4-202ENST00000488683 NKX6-3A6NJ46 265 aa10.24□□□□□ -0.77
CLIC4-202ENST00000488683 FNDC10F2Z333 226 aa10.24□□□□□ -0.77
CLIC4-202ENST00000488683 TNFRSF1AP19438 455 aa10.24□□□□□ -0.77
CLIC4-202ENST00000488683 GRNP28799 593 aaKnown RBP10.24□□□□□ -0.77
CLIC4-202ENST00000488683 Q8NA96 180 aa10.24□□□□□ -0.77
CLIC4-202ENST00000488683 TMEM18Q96B42 140 aa10.24□□□□□ -0.77
CLIC4-202ENST00000488683 A8MWP6 167 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 CD24P25063 80 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 CD69Q07108 199 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 OR5AU1Q8NGC0 362 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 OR5B3Q8NH48 314 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 MS4A10Q96PG2 267 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 SLC25A2Q9BXI2 301 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 GAL3ST2Q9H3Q3 398 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 NDUFA4L2Q9NRX3 87 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 FKBP11Q9NYL4 201 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 ANKHD1Q8IWZ3 2542 aaKnown RBP10.23□□□□□ -0.77
CLIC4-202ENST00000488683 TMEM178BH3BS89 294 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 MT-CO2P00403 227 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 OR5G3P0C626 314 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 AREGP15514 252 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 ORM2P19652 201 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 RPL8P62917 257 aaKnown RBP10.23□□□□□ -0.77
CLIC4-202ENST00000488683 GFRALQ6UXV0 394 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 PATE2Q6UY27 113 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 Q6ZWC4 215 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 OR5AN1Q8NGI8 311 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 OR1L8Q8NGR8 309 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 FLYWCH2Q96CP2 140 aaKnown RBP10.23□□□□□ -0.77
CLIC4-202ENST00000488683 RCHY1Q96PM5 261 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 IL36BQ9NZH7 164 aa10.23□□□□□ -0.77
CLIC4-202ENST00000488683 POLR3KQ9Y2Y1 108 aaPredicted RBP10.23□□□□□ -0.77
CLIC4-202ENST00000488683 PPIAL4EA0A075B759 164 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 C9JCJ5 164 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 PPIAL4DF5H284 164 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 CORTO00230 105 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 PPIAL4FP0DN26 164 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 PAX1P15863 534 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 YPEL3P61236 119 aaPredicted RBP10.22□□□□□ -0.77
CLIC4-202ENST00000488683 UBE2L3P68036 154 aaKnown RBP10.22□□□□□ -0.77
CLIC4-202ENST00000488683 REC114Q7Z4M0 266 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 PRSS33Q8NF86 280 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 OSR1Q8TAX0 266 aaPredicted RBP10.22□□□□□ -0.77
CLIC4-202ENST00000488683 PPIAL4AQ9Y536 164 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 NCOR2Q9Y618 2525 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 PSMB11A5LHX3 300 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 IGLV2-8P01709 118 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 CMTM2Q8TAZ6 248 aa10.22□□□□□ -0.77
CLIC4-202ENST00000488683 PRRG2O14669 202 aa10.21□□□□□ -0.77
CLIC4-202ENST00000488683 APOA2P02652 100 aa10.21□□□□□ -0.77
CLIC4-202ENST00000488683 RANP62826 216 aaKnown RBP10.21□□□□□ -0.77
CLIC4-202ENST00000488683 MEF2CQ06413 473 aaPredicted RBP10.21□□□□□ -0.77
CLIC4-202ENST00000488683 RPEL1Q2QD12 228 aa10.21□□□□□ -0.77
CLIC4-202ENST00000488683 LINC01560Q8TB33 94 aa10.21□□□□□ -0.77
CLIC4-202ENST00000488683 HSPB9Q9BQS6 159 aa10.21□□□□□ -0.77
CLIC4-202ENST00000488683 SLC25A33Q9BSK2 321 aa10.21□□□□□ -0.77
CLIC4-202ENST00000488683 ZNF355PQ9NSJ1 428 aa10.21□□□□□ -0.77
CLIC4-202ENST00000488683 TMEM106BQ9NUM4 274 aa10.21□□□□□ -0.77
CLIC4-202ENST00000488683 TECRQ9NZ01 308 aaKnown RBP10.21□□□□□ -0.77
CLIC4-202ENST00000488683 S4R3C0 116 aa10.21□□□□□ -0.77
CLIC4-202ENST00000488683 A0A1W2PRD5 423 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 A0A1W2PRF3 423 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 A0A1W2PRM7 423 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 IGLV2-23P01705 113 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 FAM87AP0C7U9 286 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 CRISP2P16562 243 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 IQCJQ1A5X6 159 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 TMEM30BQ3MIR4 351 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 TMEM177Q53S58 311 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 BAGE3Q86Y29 109 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 BAGE2Q86Y30 109 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 SLC35E1Q96K37 410 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 FAM167A-AS1Q96KT0 104 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 TBX15Q96SF7 602 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 NAT8BQ9UHF3 227 aa10.21□□□□□ -0.78
CLIC4-202ENST00000488683 A0A1W2PPI3 338 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 E7EQL1 145 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 TNFRSF13BO14836 293 aaPredicted RBP10.2□□□□□ -0.78
CLIC4-202ENST00000488683 GCGP01275 180 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms