RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 POM121L12Q8N7R1 296 aa13.77□□□□□ -0.21
GGPS1-206ENST00000488594 DNAH6Q9C0G6 4158 aa13.77□□□□□ -0.21
GGPS1-206ENST00000488594 ZNF688P0C7X2 276 aa13.76□□□□□ -0.21
GGPS1-206ENST00000488594 P2RY1P47900 373 aa13.76□□□□□ -0.21
GGPS1-206ENST00000488594 UCP3P55916 312 aa13.76□□□□□ -0.21
GGPS1-206ENST00000488594 SLC35G3Q8N808 338 aa13.76□□□□□ -0.21
GGPS1-206ENST00000488594 SAMD12Q8N8I0 201 aa13.76□□□□□ -0.21
GGPS1-206ENST00000488594 Q9H521 79 aa13.76□□□□□ -0.21
GGPS1-206ENST00000488594 DEFB131BA0A096LNP1 70 aa13.75□□□□□ -0.21
GGPS1-206ENST00000488594 KNCNA6PVL3 124 aa13.75□□□□□ -0.21
GGPS1-206ENST00000488594 CLN5O75503 358 aa13.75□□□□□ -0.21
GGPS1-206ENST00000488594 ACTL10Q5JWF8 245 aa13.75□□□□□ -0.21
GGPS1-206ENST00000488594 CSNK1G2-AS1Q8NCQ2 148 aa13.75□□□□□ -0.21
GGPS1-206ENST00000488594 DCANP1Q8TF63 244 aa13.75□□□□□ -0.21
GGPS1-206ENST00000488594 PRSS29PA6NIE9 313 aa13.74□□□□□ -0.21
GGPS1-206ENST00000488594 SPINK9Q5DT21 86 aa13.74□□□□□ -0.21
GGPS1-206ENST00000488594 OR4X1Q8NH49 305 aa13.74□□□□□ -0.21
GGPS1-206ENST00000488594 TMEM230Q96A57 120 aa13.74□□□□□ -0.21
GGPS1-206ENST00000488594 NDUFAF3Q9BU61 184 aa13.74□□□□□ -0.21
GGPS1-206ENST00000488594 PDCD10Q9BUL8 212 aa13.74□□□□□ -0.21
GGPS1-206ENST00000488594 HELTA6NFD8 242 aa13.73□□□□□ -0.21
GGPS1-206ENST00000488594 ATG12O94817 140 aa13.73□□□□□ -0.21
GGPS1-206ENST00000488594 IFNA17P01571 189 aa13.73□□□□□ -0.21
GGPS1-206ENST00000488594 NUTF2P61970 127 aaKnown RBP13.73□□□□□ -0.21
GGPS1-206ENST00000488594 C12orf74Q32Q52 190 aa13.73□□□□□ -0.21
GGPS1-206ENST00000488594 GPX8Q8TED1 209 aa13.73□□□□□ -0.21
GGPS1-206ENST00000488594 C1QTNF4Q9BXJ3 329 aa13.73□□□□□ -0.21
GGPS1-206ENST00000488594 CLEC5AQ9NY25 188 aa13.73□□□□□ -0.21
GGPS1-206ENST00000488594 TRAV30A0A087WSZ9 112 aa13.72□□□□□ -0.21
GGPS1-206ENST00000488594 RNASE2P10153 161 aaKnown RBP13.72□□□□□ -0.21
GGPS1-206ENST00000488594 NPY1RP25929 384 aa13.72□□□□□ -0.21
GGPS1-206ENST00000488594 OPRK1P41145 380 aa13.72□□□□□ -0.21
GGPS1-206ENST00000488594 RPL5P46777 297 aaKnown RBP13.72□□□□□ -0.21
GGPS1-206ENST00000488594 AP2S1P53680 142 aaPredicted RBP13.72□□□□□ -0.21
GGPS1-206ENST00000488594 NEDD8Q15843 81 aa13.72□□□□□ -0.21
GGPS1-206ENST00000488594 IZUMO4Q1ZYL8 232 aa13.72□□□□□ -0.21
GGPS1-206ENST00000488594 RAB40CQ96S21 281 aa13.72□□□□□ -0.21
GGPS1-206ENST00000488594 SCPEP1Q9HB40 452 aa13.72□□□□□ -0.21
GGPS1-206ENST00000488594 CELA1Q9UNI1 258 aa13.72□□□□□ -0.21
GGPS1-206ENST00000488594 A0A0B4J293 547 aa13.71□□□□□ -0.21
GGPS1-206ENST00000488594 AKR1C2P52895 323 aa13.71□□□□□ -0.21
GGPS1-206ENST00000488594 PPP5CP53041 499 aa13.71□□□□□ -0.21
GGPS1-206ENST00000488594 DHRS2Q13268 280 aa13.71□□□□□ -0.21
GGPS1-206ENST00000488594 ENY2Q9NPA8 101 aa13.71□□□□□ -0.21
GGPS1-206ENST00000488594 RTL8CO15255 209 aa13.71□□□□□ -0.22
GGPS1-206ENST00000488594 IGKV1-5P01602 117 aa13.71□□□□□ -0.22
GGPS1-206ENST00000488594 P0C879 139 aa13.71□□□□□ -0.22
GGPS1-206ENST00000488594 RCVRNP35243 200 aa13.71□□□□□ -0.22
GGPS1-206ENST00000488594 HOXA1P49639 335 aaPredicted RBP13.71□□□□□ -0.22
GGPS1-206ENST00000488594 RND3P61587 244 aa13.71□□□□□ -0.22
GGPS1-206ENST00000488594 LGALS9BQ3B8N2 356 aa13.71□□□□□ -0.22
GGPS1-206ENST00000488594 PSMG4Q5JS54 123 aa13.71□□□□□ -0.22
GGPS1-206ENST00000488594 ZNF486Q96H40 463 aaPredicted RBP13.71□□□□□ -0.22
GGPS1-206ENST00000488594 FNDC4Q9H6D8 234 aaPredicted RBP13.71□□□□□ -0.22
GGPS1-206ENST00000488594 MRPL36Q9P0J6 103 aaKnown RBP13.71□□□□□ -0.22
GGPS1-206ENST00000488594 SMIM31A0A1B0GVY4 71 aa13.7□□□□□ -0.22
GGPS1-206ENST00000488594 IGKV1-17P01599 117 aa13.7□□□□□ -0.22
GGPS1-206ENST00000488594 RPS19P39019 145 aaKnown RBP13.7□□□□□ -0.22
GGPS1-206ENST00000488594 ETV6P41212 452 aa13.7□□□□□ -0.22
GGPS1-206ENST00000488594 ZNF767PQ75MW2 155 aa13.7□□□□□ -0.22
GGPS1-206ENST00000488594 U3KQE9 123 aa13.7□□□□□ -0.22
GGPS1-206ENST00000488594 RPS10-NUDT3A0A1W2PQS6 291 aa13.69□□□□□ -0.22
GGPS1-206ENST00000488594 PGAM2P15259 253 aa13.69□□□□□ -0.22
GGPS1-206ENST00000488594 SNRPD3P62318 126 aaKnown RBP13.69□□□□□ -0.22
GGPS1-206ENST00000488594 SEPSECSQ9HD40 501 aaKnown RBP13.69□□□□□ -0.22
GGPS1-206ENST00000488594 AGRNO00468 2067 aa13.69□□□□□ -0.22
GGPS1-206ENST00000488594 FAT2Q9NYQ8 4349 aa13.68□□□□□ -0.22
GGPS1-206ENST00000488594 M0R2N4 97 aa13.68□□□□□ -0.22
GGPS1-206ENST00000488594 PIGPP57054 158 aa13.68□□□□□ -0.22
GGPS1-206ENST00000488594 BSXQ3C1V8 233 aa13.68□□□□□ -0.22
GGPS1-206ENST00000488594 TIGITQ495A1 244 aa13.68□□□□□ -0.22
GGPS1-206ENST00000488594 C16orf54Q6UWD8 224 aa13.68□□□□□ -0.22
GGPS1-206ENST00000488594 Q8WTZ3 238 aa13.68□□□□□ -0.22
GGPS1-206ENST00000488594 GLMPQ8WWB7 406 aa13.68□□□□□ -0.22
GGPS1-206ENST00000488594 TP53RKQ96S44 253 aa13.68□□□□□ -0.22
GGPS1-206ENST00000488594 PKHD1P08F94 4074 aa13.67□□□□□ -0.22
GGPS1-206ENST00000488594 HNRNPCP07910 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
GGPS1-206ENST00000488594 TGFBR1P36897 503 aa13.67□□□□□ -0.22
GGPS1-206ENST00000488594 MLANAQ16655 118 aa13.67□□□□□ -0.22
GGPS1-206ENST00000488594 OR1S2Q8NGQ3 325 aa13.67□□□□□ -0.22
GGPS1-206ENST00000488594 RRNAD1Q96FB5 475 aaKnown RBP13.67□□□□□ -0.22
GGPS1-206ENST00000488594 FAM210BQ96KR6 192 aa13.67□□□□□ -0.22
GGPS1-206ENST00000488594 XCL2Q9UBD3 114 aa13.67□□□□□ -0.22
GGPS1-206ENST00000488594 C3orf85A0A1B0GTC6 90 aa13.66□□□□□ -0.22
GGPS1-206ENST00000488594 TMEM189A5PLL7 270 aa13.66□□□□□ -0.22
GGPS1-206ENST00000488594 IFNA10P01566 189 aa13.66□□□□□ -0.22
GGPS1-206ENST00000488594 IFNA21P01568 189 aa13.66□□□□□ -0.22
GGPS1-206ENST00000488594 APOA1P02647 267 aa13.66□□□□□ -0.22
GGPS1-206ENST00000488594 SPART-AS1P0CW21 52 aa13.66□□□□□ -0.22
GGPS1-206ENST00000488594 YPEL3P61236 119 aaPredicted RBP13.66□□□□□ -0.22
GGPS1-206ENST00000488594 TRIM16LQ309B1 348 aa13.66□□□□□ -0.22
GGPS1-206ENST00000488594 SNX29P2Q8IUI4 249 aa13.66□□□□□ -0.22
GGPS1-206ENST00000488594 NEU1Q99519 415 aa13.66□□□□□ -0.22
GGPS1-206ENST00000488594 DNAH2Q9P225 4427 aa13.66□□□□□ -0.22
GGPS1-206ENST00000488594 RYR1P21817 5038 aa13.66□□□□□ -0.22
GGPS1-206ENST00000488594 FAM90A26D6RGX4 464 aa13.65□□□□□ -0.22
GGPS1-206ENST00000488594 H3BMM0 161 aa13.65□□□□□ -0.22
GGPS1-206ENST00000488594 IGLC1P0CG04 106 aa13.65□□□□□ -0.22
GGPS1-206ENST00000488594 SLC25A4P12235 298 aa13.65□□□□□ -0.22
GGPS1-206ENST00000488594 PI3P19957 117 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms