RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 TEX36Q5VZQ5 186 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 SPOPLQ6IQ16 392 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 TRAPPC5Q8IUR0 188 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 COMMD5Q9GZQ3 224 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 RNASE7Q9H1E1 156 aaKnown RBP0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 TRABDQ9H4I3 376 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 OR5AC2Q9NZP5 309 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 ERGIC3Q9Y282 383 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 TENM3Q9P273 2699 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 PQLC2LA1A4F0 135 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 SMIM9A6NGZ8 99 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 CRYZL1O95825 349 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 TCRBP04435 133 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 SMIM10L2AP0DMW4 78 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 SMIM10L2BP0DMW5 78 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 SSR2P43308 183 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 DEFA3P59666 94 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 RHEBQ15382 184 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 RNASE10Q5GAN6 216 aaKnown RBP0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 FAM19A2Q8N3H0 131 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 C12orf45Q8N5I9 185 aaPredicted RBP0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 LINC00311Q8N616 119 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 SIGLECL1Q8N7X8 197 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 C12orf29Q8N999 325 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 OR4E2Q8NGC2 313 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 OR4D11Q8NGI4 311 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 DCUN1D1Q96GG9 259 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 OBSCN-AS1Q96MR7 158 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 SLC39A9Q9NUM3 307 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 C14orf105Q9NVL8 296 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 CYSLTR1Q9Y271 337 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 SCN10AQ9Y5Y9 1956 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 CEP192Q8TEP8 1941 aa0.62□□□□□ -2.31
R3HDM1-219ENST00000488035 IGKV2D-26A0A0A0MRZ7 120 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 TRAV3A0A0B4J244 114 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 A0A0D9SG52 128 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 GOLGA6L19H0YKK7 550 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 C19orf84I3L1E1 186 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 GEMIN2O14893 280 aaKnown RBP0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 IFNA10P01566 189 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 IL9P15248 144 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 ZNF93P35789 620 aaPredicted RBP0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 LINC01554Q52M75 96 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 DPPA3Q6W0C5 159 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 DEFB128Q7Z7B8 93 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 HIST3H2BBQ8N257 126 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 LINC00471Q8N535 108 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 C20orf27Q9GZN8 174 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 DCSTAMPQ9H295 470 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 UBAP1Q9NZ09 502 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 PRELID3BQ9Y3B1 194 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 SNURFQ9Y675 71 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 TNRC6AQ8NDV7 1962 aaKnown RBP0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 PLB1Q6P1J6 1458 aa0.61□□□□□ -2.31
R3HDM1-219ENST00000488035 DOCK3Q8IZD9 2030 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 SCN3AQ9NY46 2000 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 ECM29Q5VYK3 1845 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 PIRO00625 290 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 OR1I1O60431 355 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 ZNF682O95780 498 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 MGST1P10620 155 aaKnown RBP0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 COX6A1P12074 109 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 BRS3P32247 399 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 OMPP47874 163 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 CNBPP62633 177 aaKnown RBP0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 PDE6HQ13956 83 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 CDK10Q15131 360 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 C12orf74Q32Q52 190 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 OR4C6Q8NH72 309 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 WFDC5Q8TCV5 224 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 OSTCQ9NRP0 149 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 UQCC1Q9NVA1 299 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 NEO1Q92859 1461 aa0.6□□□□□ -2.31
R3HDM1-219ENST00000488035 RIC1Q4ADV7 1423 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 hADV38S2A0JD32 116 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 FUOMA2VDF0 154 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 SMIM23A6NLE4 172 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 LYZL6O75951 148 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 RPP14O95059 124 aaKnown RBP0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 SMIM17P0DL12 118 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 MIFP14174 115 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 RAB4BP61018 213 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 IAH1Q2TAA2 248 aaPredicted RBP0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 DEFB113Q30KQ7 82 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 OOSP2Q86WS3 158 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 PHF13Q86YI8 300 aaPredicted RBP0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 OR13D1Q8NGV5 346 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 ADAT3Q96EY9 351 aaPredicted RBP0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 IDI2-AS1Q9NZ38 188 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 ZFP30Q9Y2G7 519 aa0.59□□□□□ -2.31
R3HDM1-219ENST00000488035 CCDC144AA2RUR9 1427 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 hCG_1818297A0A087WSY0 165 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 LOC110117498A0A087WWA1 95 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 TRBV6-7A0A0A0MS04 114 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 TRBV6-8A0A0A6YYG3 113 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 A8MT66 165 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 C1orf196B1AJZ1 125 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 UBL3O95164 117 aa0.58□□□□□ -2.32
R3HDM1-219ENST00000488035 TCL1BO95988 128 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms