RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 OR8J2Q8NGG1 315 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 TERB2Q8NHR7 220 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 PIGXQ8TBF5 258 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 DTD1Q8TEA8 209 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 THEM6Q8WUY1 208 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 MAFIPQ8WZ33 124 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 HIST1H2BAQ96A08 127 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 ZNF426Q9BUY5 554 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 NMNAT1Q9HAN9 279 aaPredicted RBP1.99□□□□□ -2.09
USP48-209ENST00000487880 SPACA1Q9HBV2 294 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 UQCC1Q9NVA1 299 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 MRPL16Q9NX20 251 aaKnown RBP1.99□□□□□ -2.09
USP48-209ENST00000487880 TAS2R13Q9NYV9 303 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 TAS2R8Q9NYW2 309 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 COMMD3Q9UBI1 195 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 PCTPQ9UKL6 214 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 SLC35A3Q9Y2D2 325 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 FIS1Q9Y3D6 152 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 V9GYS6 101 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 A0A0G2JMZ2 1700 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 LRRC37A2A6NM11 1700 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 LRRC37AA6NMS7 1700 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 LY75O60449 1722 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 ABCA3Q99758 1704 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 ANKRD31Q8N7Z5 1873 aa1.99□□□□□ -2.09
USP48-209ENST00000487880 A0A087WWC5 75 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 TRBV6-7A0A0A0MS04 114 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 A0A1B0GTI1 187 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 TMEM269A0A1B0GVZ9 245 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 GGT3PA6NGU5 568 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 K7EP13 123 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 K7ERQ8 282 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 M0R143 59 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 FAAHO00519 579 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 TP53I11O14683 189 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 ARPC5O15511 151 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 SH2D1AO60880 128 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 STK16O75716 305 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 NDUFB6O95139 128 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 SOX14O95416 240 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 AHSA1O95433 338 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 ZNF682O95780 498 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 PPBPP02775 128 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 HLA-DQB2P05538 268 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 ADCYAP1P18509 176 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 S100A3P33764 101 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 OMPP47874 163 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 IDH3GP51553 393 aaPredicted RBP1.98□□□□□ -2.09
USP48-209ENST00000487880 OR10A3P58181 314 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 KRTAP12-1P59990 96 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 RPS20P60866 119 aaKnown RBP1.98□□□□□ -2.09
USP48-209ENST00000487880 ARF6P62330 175 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 REEP5Q00765 189 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 FABP5Q01469 135 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 JOSD1Q15040 202 aaPredicted RBP1.98□□□□□ -2.09
USP48-209ENST00000487880 MMDQ15546 238 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 OR8G1Q15617 311 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 MAPK14Q16539 360 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 GLT8D1Q68CQ7 371 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 OR10K2Q6IF99 312 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 SMIM15Q7Z3B0 74 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 TRAPPC5Q8IUR0 188 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 SLC25A45Q8N413 288 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 ACBD7Q8N6N7 88 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 SLC30A7Q8NEW0 376 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 OR8G5Q8NG78 346 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 OR11G2Q8NGC1 345 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 OR4K17Q8NGC6 315 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 OR5B17Q8NGF7 314 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 OR2D3Q8NGH3 330 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 OR13C8Q8NGS7 320 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 REEP6Q96HR9 211 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 OR52E6Q96RD3 313 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 C1QTNF6Q9BXI9 259 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 TLNRD1Q9H1K6 362 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 UBQLN4Q9NRR5 601 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 TNFSF18Q9UNG2 199 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 GBF1Q92538 1859 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 SIP14410 1827 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 MUC6Q6W4X9 2439 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 STRCP1A6NGW2 1772 aa1.98□□□□□ -2.09
USP48-209ENST00000487880 NRXN2Q9P2S2 1712 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 CITO14578 2027 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 FXYD6-FXYD2A0A087WZ82 144 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 A0A1B0GW64 132 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 TMEM250H0YL14 139 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 M0QZ92 97 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 EEF1E1O43324 174 aaKnown RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 ARL6IP5O75915 188 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 SIX6O95475 246 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 APODP05090 189 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 C8GP07360 202 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 GUSBP08236 651 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 CD14P08571 375 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 LIMS3P0CW19 117 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 LIMS4P0CW20 117 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 CSRP1P21291 193 aaKnown RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 GNG10P50151 68 aa1.97□□□□□ -2.09
USP48-209ENST00000487880 ZNF140P52738 457 aaPredicted RBP1.97□□□□□ -2.09
USP48-209ENST00000487880 STC1P52823 247 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms