RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 SCNM1Q9BWG6 230 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 MAP1LC3AQ9H492 121 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 GVINP1Q7Z2Y8 2422 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 NUP210Q8TEM1 1887 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 SLAQ13239 276 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 GOLT1AQ6ZVE7 132 aa12.67□□□□□ -0.38
HLA-DQB1-209ENST00000487676 LOC107984156A0A0G2JMH3 177 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 GUSBP1Q15486 140 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 CLEC2AQ6UVW9 174 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 ARL17AQ8IVW1 177 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 DCTN5Q9BTE1 182 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 FSCN3Q9NQT6 498 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 H3BTX0 84 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 IGLV3-19P01714 112 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 MORN2Q502X0 79 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 TTC9CQ8N5M4 171 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 Q6ZSR3 168 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 FAM222BQ8WU58 562 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 PYYP10082 97 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 ANOS1P23352 680 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 GNG5P63218 68 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 TWIST1Q15672 202 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 Q1RN00 199 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 BHLHA15Q7RTS1 189 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 SPACA3Q8IXA5 215 aa12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB1-209ENST00000487676 TRGV8A0A0C4DH27 118 aa12.65□□□□□ -0.38
HLA-DQB1-209ENST00000487676 ORM1P02763 201 aa12.65□□□□□ -0.38
HLA-DQB1-209ENST00000487676 HOXA4Q00056 320 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQB1-209ENST00000487676 TMUB1Q9BVT8 246 aa12.65□□□□□ -0.38
HLA-DQB1-209ENST00000487676 H3BRM9 83 aa12.65□□□□□ -0.38
HLA-DQB1-209ENST00000487676 NHP2Q9NX24 153 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB1-209ENST00000487676 AGFG2O95081 481 aa12.65□□□□□ -0.38
HLA-DQB1-209ENST00000487676 OR10W1Q8NGF6 305 aa12.65□□□□□ -0.38
HLA-DQB1-209ENST00000487676 TNFRSF14Q92956 283 aa12.65□□□□□ -0.38
HLA-DQB1-209ENST00000487676 RNF7Q9UBF6 113 aa12.65□□□□□ -0.38
HLA-DQB1-209ENST00000487676 A0A0G2JMM0 328 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 A0A1W2PPB8 328 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 LINC00473A8K010 186 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 KIR3DP1A8MWS1 328 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 H3BVH4 76 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 K7EN84 100 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 IGHV3-48P01763 117 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 CKS1BP61024 79 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 CACNG7P62955 275 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 TNFAIP6P98066 277 aaPredicted RBP12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 Q6AWC8 147 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 MOB3BQ86TA1 216 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 Q8NFD4 153 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 IMMP1LQ96LU5 166 aa12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 MBNL3Q9NUK0 354 aaKnown RBP12.65□□□□□ -0.39
HLA-DQB1-209ENST00000487676 C9orf118A6NHY6 69 aa12.64□□□□□ -0.39
HLA-DQB1-209ENST00000487676 TNFRSF1AP19438 455 aa12.64□□□□□ -0.39
HLA-DQB1-209ENST00000487676 OR9G1Q8NH87 305 aa12.64□□□□□ -0.39
HLA-DQB1-209ENST00000487676 TTTY12Q9BZ98 90 aa12.64□□□□□ -0.39
HLA-DQB1-209ENST00000487676 ODF3L1Q8IXM7 274 aa12.64□□□□□ -0.39
HLA-DQB1-209ENST00000487676 RPEQ96AT9 228 aa12.64□□□□□ -0.39
HLA-DQB1-209ENST00000487676 AKIRIN1Q9H9L7 192 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-209ENST00000487676 SMIM27A0A1W2PRY6 76 aa12.64□□□□□ -0.39
HLA-DQB1-209ENST00000487676 NDUFB3O43676 98 aa12.64□□□□□ -0.39
HLA-DQB1-209ENST00000487676 WNT2P09544 360 aa12.64□□□□□ -0.39
HLA-DQB1-209ENST00000487676 CD69Q07108 199 aa12.64□□□□□ -0.39
HLA-DQB1-209ENST00000487676 NOTCH4Q99466 2003 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 IGHV3-21A0A0B4J1V1 117 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 PSPNO60542 156 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 CFHR1Q03591 330 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 ORMDL3Q8N138 153 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 SIT1Q9Y3P8 196 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 COLCA1Q6ZS62 124 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 C17orf82Q86X59 251 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 A0A1W2PQM1 296 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 SH2D7A6NKC9 451 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 REG1BP48304 166 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 HES1Q14469 280 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 TMEM108Q6UXF1 575 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 ZNF714Q96N38 554 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 C18orf15Q96N68 181 aa12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 MCRIP2Q9BUT9 160 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB1-209ENST00000487676 HBDP02042 147 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 IL4P05112 153 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 HCP5Q6MZN7 132 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 CT55Q8WUE5 264 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 IDI2-AS1Q9NZ38 188 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 TRAV5A0A0B4J249 113 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 PSG7Q13046 419 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 VWC2Q2TAL6 325 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 MRPL14Q6P1L8 145 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 NCOA6Q14686 2063 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 PPIAL4EA0A075B759 164 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 TRAV8-6A0A0B4J262 113 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 UPK2O00526 184 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 PPIAL4FP0DN26 164 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 RPL27AP46776 148 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 PRCDQ00LT1 54 aa12.62□□□□□ -0.39
HLA-DQB1-209ENST00000487676 MOSP00540 346 aa12.61□□□□□ -0.39
HLA-DQB1-209ENST00000487676 PSMB2P49721 201 aa12.61□□□□□ -0.39
HLA-DQB1-209ENST00000487676 ERVK11-1P61568 191 aa12.61□□□□□ -0.39
HLA-DQB1-209ENST00000487676 OR5AN1Q8NGI8 311 aa12.61□□□□□ -0.39
HLA-DQB1-209ENST00000487676 UFC1Q9Y3C8 167 aa12.61□□□□□ -0.39
HLA-DQB1-209ENST00000487676 ARHGAP21Q5T5U3 1957 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms