RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 MISP3Q96FF7 219 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 VSIG2Q96IQ7 327 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 CLUHP3Q96NS8 147 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 MGLLQ99685 303 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 HINT2Q9BX68 163 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 QTRT1Q9BXR0 403 aaKnown RBP3.89□□□□□ -1.79
COL4A3-206ENST00000487633 WDR12Q9GZL7 423 aaKnown RBP3.89□□□□□ -1.79
COL4A3-206ENST00000487633 NDUFA4L2Q9NRX3 87 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 LSM2Q9Y333 95 aaKnown RBP3.89□□□□□ -1.79
COL4A3-206ENST00000487633 U3KQE9 123 aa3.89□□□□□ -1.79
COL4A3-206ENST00000487633 TEX48A0A1B0GUV7 120 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 ZNF701M0R085 212 aaPredicted RBP3.88□□□□□ -1.79
COL4A3-206ENST00000487633 SIVA1O15304 175 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 TNFAIP8O95379 198 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 IGLV2-8P01709 118 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 ATP5G1P05496 136 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 EIF4EP06730 217 aaKnown RBP3.88□□□□□ -1.79
COL4A3-206ENST00000487633 GNB3P16520 340 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 PSMA1P25786 263 aaKnown RBP3.88□□□□□ -1.79
COL4A3-206ENST00000487633 CRYBB3P26998 211 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 ATP5G3P48201 142 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 CLDN12P56749 244 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 RPS25P62851 125 aaKnown RBP3.88□□□□□ -1.79
COL4A3-206ENST00000487633 MLLT11Q13015 90 aaPredicted RBP3.88□□□□□ -1.79
COL4A3-206ENST00000487633 TBCEQ15813 527 aaPredicted RBP3.88□□□□□ -1.79
COL4A3-206ENST00000487633 NEDD8Q15843 81 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 HSD17B12Q53GQ0 312 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 C1orf100Q5SVJ3 147 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 SPARTQ8N0X7 666 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 OR4B1Q8NGF8 309 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 OR4S2Q8NH73 311 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 VSTM2AQ8TAG5 236 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 RXFP4Q8TDU9 374 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 GNPNAT1Q96EK6 184 aaPredicted RBP3.88□□□□□ -1.79
COL4A3-206ENST00000487633 C7orf50Q9BRJ6 194 aaKnown RBP3.88□□□□□ -1.79
COL4A3-206ENST00000487633 SAV1Q9H4B6 383 aaPredicted RBP3.88□□□□□ -1.79
COL4A3-206ENST00000487633 VCX3AQ9NNX9 186 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 ACOT13Q9NPJ3 140 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 TMEM140Q9NV12 185 aa3.88□□□□□ -1.79
COL4A3-206ENST00000487633 A0A087WXM4 84 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 CBY3A6NI87 242 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 CCNKO75909 580 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 ARL6IP5O75915 188 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 NXPH4O95158 308 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 TMEM50AO95807 157 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 HLA-DQB1P01920 261 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 TRAPPC2P0DI81 140 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 TRAPPC2BP0DI82 140 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 CALRP27797 417 aaKnown RBP3.87□□□□□ -1.79
COL4A3-206ENST00000487633 GNRHRP30968 328 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 SERPINB10P48595 397 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 MFAP4P55083 255 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 KIR3DS1Q14943 382 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 ZNF79Q15937 498 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 KCTD21Q4G0X4 260 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 C16orf54Q6UWD8 224 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 AMTNQ6UX39 209 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 CDH26Q8IXH8 852 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 Q8N814 137 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 NKAIN3Q8N8D7 197 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 TSPAN14Q8NG11 270 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 CIRBP-AS1Q8TBR5 109 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 PHYHIPQ92561 330 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 PINX1Q96BK5 328 aaKnown RBP3.87□□□□□ -1.79
COL4A3-206ENST00000487633 C20orf173Q96LM9 149 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 ATP6V0BQ99437 205 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 UQCC2Q9BRT2 126 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 GINS4Q9BRT9 223 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 COMMD5Q9GZQ3 224 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 DCSTAMPQ9H295 470 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 PLGRKTQ9HBL7 147 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 CCL28Q9NRJ3 127 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 MRPS7Q9Y2R9 242 aaKnown RBP3.87□□□□□ -1.79
COL4A3-206ENST00000487633 PRELID3BQ9Y3B1 194 aa3.87□□□□□ -1.79
COL4A3-206ENST00000487633 A0A075B6Q4 140 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 TRAV12-2A0A075B6T6 113 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 LOC100506127A0A0U1RQW1 187 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 LYRM9A8MSI8 78 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 M0R2Z0 102 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 SULT1C2O00338 296 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 MFNGO00587 321 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 PDCD5O14737 125 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 GNG7O60262 68 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 CD5P06127 495 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 UCHL1P09936 223 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 NPPCP23582 126 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 MYL9P24844 172 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 RORCP51449 518 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 PAX9P55771 341 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 NUTF2P61970 127 aaKnown RBP3.86□□□□□ -1.79
COL4A3-206ENST00000487633 FABP5Q01469 135 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 SSX1Q16384 188 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 POU2AF1Q16633 256 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 SPINK9Q5DT21 86 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 FAM78BQ5VT40 261 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 C22orf42Q6IC83 251 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 ZNF600Q6ZNG1 722 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 WFDC10BQ8IUB3 73 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 BAP18Q8IXM2 172 aa3.86□□□□□ -1.79
COL4A3-206ENST00000487633 SPAG16Q8N0X2 631 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms