RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 GUSBP1Q15486 140 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 SLC35E4Q6ICL7 350 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 ZNF788Q6ZQV5 615 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 PDPNQ86YL7 162 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 TSSC4Q9Y5U2 329 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-209ENST00000487188 IGHV1OR15-9A0A0B4J2B8 117 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 K7EQM0 130 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 WNT9BO14905 357 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 PSPNO60542 156 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 SMIM13P0DJ93 91 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 SCGB1A1P11684 91 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 APOBEC3AP31941 199 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-209ENST00000487188 DUTP33316 252 aaKnown RBP5.13□□□□□ -1.59
VPS13D-209ENST00000487188 GNG5P63218 68 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 MEF2CQ06413 473 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-209ENST00000487188 RPL39P5Q59GN2 51 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 GDF5OSQ5U4N7 250 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 ZNF826PQ6ZT77 177 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 OR13A1Q8NGR1 328 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 PPP1R35Q8TAP8 253 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 TMUB1Q9BVT8 246 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 MRPL32Q9BYC8 188 aaKnown RBP5.13□□□□□ -1.59
VPS13D-209ENST00000487188 NPFFR1Q9GZQ6 430 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 FREM1Q5H8C1 2179 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 TEX48A0A1B0GUV7 120 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 TMEM238LA0A1B0GVL6 79 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 PLAUP00749 431 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 TFF1P04155 84 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 SP9P0CG40 484 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 PYYP10082 97 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 COL8A2P25067 703 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 COL8A1P27658 744 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 LGALS7P47929 136 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 RAB9AP51151 201 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 FOXG1P55316 489 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-209ENST00000487188 NXPH1P58417 271 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 SAMD5Q5TGI4 173 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 C10orf113Q5VZT2 155 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 C17orf82Q86X59 251 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-209ENST00000487188 SPEM1Q8N4L4 309 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 IGF2BP2-AS1Q96M15 143 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 JMJD8Q96S16 334 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 C19orf24Q9BVV8 132 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 C1RLQ9NZP8 487 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 B4GALT7Q9UBV7 327 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 RABAC1Q9UI14 185 aa5.13□□□□□ -1.59
VPS13D-209ENST00000487188 LSM4Q9Y4Z0 139 aaKnown RBP5.13□□□□□ -1.59
VPS13D-209ENST00000487188 TRAV5A0A0B4J249 113 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 SERTM2A0A1B0GWG4 89 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 A0A1W2PPM0 123 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 PSMB11A5LHX3 300 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 FAM90A9PA6NNJ1 464 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 C9orf172C9J069 976 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 FOLR3P41439 243 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 NRN1LQ496H8 165 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 FAM231DQ6ZW35 169 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 GGNQ86UU5 652 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 OR4X2Q8NGF9 303 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 OR1L4Q8NGR5 311 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 DCTN5Q9BTE1 182 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 IDI2-AS1Q9NZ38 188 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 BOKQ9UMX3 212 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-209ENST00000487188 SOX21Q9Y651 276 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-209ENST00000487188 PPIAL4EA0A075B759 164 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 C15orf61A6NNL5 157 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 C21orf140B9A014 251 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 IGLV2-8P01709 118 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 PPIAL4FP0DN26 164 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 TIMM23BQ5SRD1 257 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 ADAMTSL5Q6ZMM2 481 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 TEX45Q8NA69 505 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 LOC102723996A0A087X1L8 192 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 TRGV8A0A0C4DH27 118 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 A0A1W2PR77 199 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 J3QW42 95 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 TIMM8AO60220 97 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-209ENST00000487188 PRR20EP86478 221 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 PRR20CP86479 221 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 PRR20DP86480 221 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 PRR20BP86481 221 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 PRR20AP86496 221 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 ZNF146Q15072 292 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 WDR82Q6UXN9 313 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 RBPMS2Q6ZRY4 209 aaKnown RBP5.12□□□□□ -1.59
VPS13D-209ENST00000487188 OR9G4Q8NGQ1 327 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 OR9G1Q8NH87 305 aa5.12□□□□□ -1.59
VPS13D-209ENST00000487188 AKIRIN1Q9H9L7 192 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-209ENST00000487188 HCFC1P51610 2035 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 LOC389332A0A1B0GUA5 103 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 RFPL3SP0C7P2 107 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 TMPRSS3P57727 454 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 PSG3Q16557 428 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 MDP1Q86V88 176 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 ZADH2Q8N4Q0 377 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 PRNDQ9UKY0 176 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 TRIOO75962 3097 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 IGHV1-45A0A0A0MS14 117 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 PGPA6NDG6 321 aa5.11□□□□□ -1.59
VPS13D-209ENST00000487188 SMAD7O15105 426 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms