RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 COMMD1Q8N668 190 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 TEX29Q8N6K0 151 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 THAP8Q8NA92 274 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 SGMS2Q8NHU3 365 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 MBD3L1Q8WWY6 194 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 MARC2Q969Z3 335 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 FAM103A1Q9BTL3 118 aaKnown RBP6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 KRTAP17-1Q9BYP8 105 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 WNT10AQ9GZT5 417 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 PRDM13Q9H4Q3 707 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 VSIRQ9H7M9 311 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 PITPNC1Q9UKF7 332 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 SLC45A2Q9UMX9 530 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 CSPG4Q6UVK1 2322 aa6.78□□□□□ -1.32
NUDCD3-209ENST00000487118 IGLV11-55A0A075B6I3 123 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 IGKV1OR2-108A0A075B7D4 117 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 TRAV1-1A0A0B4J248 108 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 BTBD17A6NE02 478 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 I3L2K1 104 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 M0QZK8 103 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 ATP6V0E1O15342 81 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 YIF1AO95070 293 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 LY6G6DO95868 133 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 HBE1P02100 147 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 H2AFB1P0C5Y9 115 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 LINC00869P0C866 280 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 M6PRP20645 277 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 ELLP55199 621 aaPredicted RBP6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 RAB2AP61019 212 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 PRR20EP86478 221 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 PRR20CP86479 221 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 PRR20DP86480 221 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 PRR20BP86481 221 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 PRR20AP86496 221 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 ZNF616Q08AN1 781 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 ZNF726P1Q15940 193 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 ACOT6Q3I5F7 207 aaPredicted RBP6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 TMEM219Q86XT9 240 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 RPP25LQ8N5L8 163 aaKnown RBP6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 TMEM116Q8NCL8 245 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 LFNGQ8NES3 379 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 OR2T6Q8NHC8 308 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 FAM110DQ8TAY7 271 aaPredicted RBP6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 MISP3Q96FF7 219 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 RCC1LQ96I51 464 aaKnown RBP6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 TMEM68Q96MH6 324 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 FANCD2OSQ96PS1 177 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 CITED4Q96RK1 184 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 HRH4Q9H3N8 390 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 MRPL36Q9P0J6 103 aaKnown RBP6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 PXMP4Q9Y6I8 212 aa6.77□□□□□ -1.33
NUDCD3-209ENST00000487118 IGKV1D-37A0A075B6S9 117 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 SEC14L6B5MCN3 397 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 TEX46H3BTG2 121 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 K7EIM0 57 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 SMAD7O15105 426 aaKnown RBP6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 CYB5BO43169 146 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 CD5LO43866 347 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 TSPAN15O95858 294 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 MT-CO2P00403 227 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 OR10J1P30954 320 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 IER3P46695 156 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 LY6EQ16553 131 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 C19orf54Q5BKX5 351 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 MIC13Q5XKP0 118 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 UQCC3Q6UW78 93 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 Q6YL49 198 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 CYP2G1PQ6ZSU1 146 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 STPG3Q8N7X2 389 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 OR10G4Q8NGN3 311 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 OR10G9Q8NGN4 311 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 OR10G7Q8NGN6 311 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 OR5R1Q8NH85 324 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 NPIPB3Q92617 1050 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 ACY3Q96HD9 319 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 ZNF48Q96MX3 618 aaPredicted RBP6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 SCRT1Q9BWW7 348 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 ACTR3CQ9C0K3 210 aaPredicted RBP6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 SLC39A9Q9NUM3 307 aa6.76□□□□□ -1.33
NUDCD3-209ENST00000487118 CTXND1A0A1B0GTU2 59 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 TCRBV4S1A1TA0A5B7 111 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 ANKRD34BA5PLL1 514 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 SH2D7A6NKC9 451 aaPredicted RBP6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 LINC01548A6NM66 108 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 IGHV4-59P01825 116 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 IGHG2P01859 326 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 IGF1P05019 195 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 DEFA4P12838 97 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 FOSL1P15407 271 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 HIST1H1BP16401 226 aaKnown RBP6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 RND2P52198 227 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 B2MP61769 119 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 PMS2P11Q13670 270 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 AKIRIN2Q53H80 203 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 UNQ5815/PRO19632Q6UWF5 114 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 SSX7Q7RTT5 188 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 OR4X1Q8NH49 305 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 C22orf15Q8WYQ4 148 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 TRGV9Q99603 122 aa6.75□□□□□ -1.33
NUDCD3-209ENST00000487118 ZNF580Q9UK33 172 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms