RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 DEFA3P59666 94 aa16.56■□□□□ 0.24
SREBF1-214ENST00000486311 PMS2P11Q13670 270 aa16.56■□□□□ 0.24
SREBF1-214ENST00000486311 ARRDC1Q8N5I2 433 aa16.56■□□□□ 0.24
SREBF1-214ENST00000486311 PINX1Q96BK5 328 aaKnown RBP16.56■□□□□ 0.24
SREBF1-214ENST00000486311 IGHV3-49A0A0A0MS15 119 aa16.55■□□□□ 0.24
SREBF1-214ENST00000486311 INS-IGF2F8WCM5 200 aa16.55■□□□□ 0.24
SREBF1-214ENST00000486311 GNG7O60262 68 aa16.55■□□□□ 0.24
SREBF1-214ENST00000486311 IGKV1-5P01602 117 aa16.55■□□□□ 0.24
SREBF1-214ENST00000486311 PGAM2P15259 253 aa16.55■□□□□ 0.24
SREBF1-214ENST00000486311 PI3P19957 117 aa16.55■□□□□ 0.24
SREBF1-214ENST00000486311 CMC4P56277 68 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-214ENST00000486311 PIGPP57054 158 aa16.55■□□□□ 0.24
SREBF1-214ENST00000486311 IZUMO4Q1ZYL8 232 aa16.55■□□□□ 0.24
SREBF1-214ENST00000486311 FAM90A2PQ658T7 463 aa16.55■□□□□ 0.24
SREBF1-214ENST00000486311 APRG1Q8IVJ8 170 aa16.55■□□□□ 0.24
SREBF1-214ENST00000486311 LINC00476Q8WZB0 136 aa16.55■□□□□ 0.24
SREBF1-214ENST00000486311 A0A0B4J293 547 aa16.54■□□□□ 0.24
SREBF1-214ENST00000486311 NUPR2A6NF83 97 aa16.54■□□□□ 0.24
SREBF1-214ENST00000486311 SPINK9Q5DT21 86 aa16.54■□□□□ 0.24
SREBF1-214ENST00000486311 TP53RKQ96S44 253 aa16.54■□□□□ 0.24
SREBF1-214ENST00000486311 PRRT1Q99946 306 aa16.54■□□□□ 0.24
SREBF1-214ENST00000486311 MCUBQ9NWR8 336 aa16.54■□□□□ 0.24
SREBF1-214ENST00000486311 SCP2D1Q9UJQ7 156 aa16.54■□□□□ 0.24
SREBF1-214ENST00000486311 NPBWR1P48145 328 aa16.53■□□□□ 0.24
SREBF1-214ENST00000486311 TFPI2P48307 235 aa16.53■□□□□ 0.24
SREBF1-214ENST00000486311 PVRIGQ6DKI7 326 aa16.53■□□□□ 0.24
SREBF1-214ENST00000486311 TOMM20LQ6UXN7 152 aa16.53■□□□□ 0.24
SREBF1-214ENST00000486311 DUSP18Q8NEJ0 188 aa16.53■□□□□ 0.24
SREBF1-214ENST00000486311 OR4C16Q8NGL9 310 aa16.53■□□□□ 0.24
SREBF1-214ENST00000486311 GINS3Q9BRX5 216 aa16.53■□□□□ 0.24
SREBF1-214ENST00000486311 IGHV3OR16-13A0A075B7E8 117 aa16.52■□□□□ 0.24
SREBF1-214ENST00000486311 IGHV3-74A0A0B4J1X5 117 aa16.52■□□□□ 0.24
SREBF1-214ENST00000486311 C3orf85A0A1B0GTC6 90 aa16.52■□□□□ 0.24
SREBF1-214ENST00000486311 LINC00854A0A1B0GVQ3 168 aa16.52■□□□□ 0.24
SREBF1-214ENST00000486311 ATG12O94817 140 aa16.52■□□□□ 0.24
SREBF1-214ENST00000486311 SNCAP37840 140 aa16.52■□□□□ 0.24
SREBF1-214ENST00000486311 AKR1C2P52895 323 aa16.52■□□□□ 0.24
SREBF1-214ENST00000486311 ZNF124Q15973 351 aa16.52■□□□□ 0.24
SREBF1-214ENST00000486311 MZT2BQ6NZ67 158 aa16.52■□□□□ 0.24
SREBF1-214ENST00000486311 CEMP1Q6PRD7 247 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-214ENST00000486311 TMEM217Q8N7C4 229 aa16.52■□□□□ 0.24
SREBF1-214ENST00000486311 SLC35G3Q8N808 338 aa16.52■□□□□ 0.24
SREBF1-214ENST00000486311 IGKV3-7A0A075B6H7 116 aa16.51■□□□□ 0.23
SREBF1-214ENST00000486311 ST8SIA3O43173 380 aa16.51■□□□□ 0.23
SREBF1-214ENST00000486311 CD5P06127 495 aa16.51■□□□□ 0.23
SREBF1-214ENST00000486311 CSTL1Q9H114 145 aa16.51■□□□□ 0.23
SREBF1-214ENST00000486311 VSIRQ9H7M9 311 aa16.51■□□□□ 0.23
SREBF1-214ENST00000486311 LYRM1O43325 122 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 IFNA17P01571 189 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 PAFAH1B2P68402 229 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 ASAH1Q13510 395 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 SCGB2B2Q4G0G5 96 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 ZNF600Q6ZNG1 722 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 TCF24Q7RTU0 167 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 GBGT1Q8N5D6 347 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 OR4D10Q8NGI6 311 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 TERB2Q8NHR7 220 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 ZFAND1Q8TCF1 268 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 ST8SIA2Q92186 375 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 ZFAND3Q9H8U3 227 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 COPZ2Q9P299 210 aa16.5■□□□□ 0.23
SREBF1-214ENST00000486311 MPTX1A8MV57 137 aa16.49■□□□□ 0.23
SREBF1-214ENST00000486311 CORTO00230 105 aa16.49■□□□□ 0.23
SREBF1-214ENST00000486311 TMEM50AO95807 157 aa16.49■□□□□ 0.23
SREBF1-214ENST00000486311 RNASE2P10153 161 aaKnown RBP16.49■□□□□ 0.23
SREBF1-214ENST00000486311 SUB1P53999 127 aaKnown RBP eCLIP16.49■□□□□ 0.23
SREBF1-214ENST00000486311 TRIM16LQ309B1 348 aa16.49■□□□□ 0.23
SREBF1-214ENST00000486311 CCDC71LQ8N9Z2 235 aa16.49■□□□□ 0.23
SREBF1-214ENST00000486311 SCGB3A2Q96PL1 93 aa16.49■□□□□ 0.23
SREBF1-214ENST00000486311 PDCD10Q9BUL8 212 aa16.49■□□□□ 0.23
SREBF1-214ENST00000486311 PUS1Q9Y606 427 aaKnown RBP eCLIP16.49■□□□□ 0.23
SREBF1-214ENST00000486311 LY6G6CO95867 125 aa16.48■□□□□ 0.23
SREBF1-214ENST00000486311 APOHP02749 345 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-214ENST00000486311 UCP1P25874 307 aa16.48■□□□□ 0.23
SREBF1-214ENST00000486311 SP6Q3SY56 376 aa16.48■□□□□ 0.23
SREBF1-214ENST00000486311 FAAP20Q6NZ36 180 aa16.48■□□□□ 0.23
SREBF1-214ENST00000486311 LILRB2Q8N423 598 aa16.48■□□□□ 0.23
SREBF1-214ENST00000486311 OR51S1Q8NGJ8 323 aa16.48■□□□□ 0.23
SREBF1-214ENST00000486311 OR13C8Q8NGS7 320 aa16.48■□□□□ 0.23
SREBF1-214ENST00000486311 GATAD1Q8WUU5 269 aa16.48■□□□□ 0.23
SREBF1-214ENST00000486311 A0A0G2JRQ6 117 aa16.47■□□□□ 0.23
SREBF1-214ENST00000486311 PLA2G10O15496 165 aa16.47■□□□□ 0.23
SREBF1-214ENST00000486311 B3GALNT1O75752 331 aa16.47■□□□□ 0.23
SREBF1-214ENST00000486311 HOXA1P49639 335 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-214ENST00000486311 IFITM3Q01628 133 aa16.47■□□□□ 0.23
SREBF1-214ENST00000486311 RRNAD1Q96FB5 475 aaKnown RBP16.47■□□□□ 0.23
SREBF1-214ENST00000486311 SLC25A21Q9BQT8 299 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-214ENST00000486311 MS4A6AQ9H2W1 248 aa16.47■□□□□ 0.23
SREBF1-214ENST00000486311 TBC1D24Q9ULP9 559 aa16.47■□□□□ 0.23
SREBF1-214ENST00000486311 KLK5Q9Y337 293 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-214ENST00000486311 TRAV2A0A0B4J234 112 aa16.46■□□□□ 0.23
SREBF1-214ENST00000486311 A0A1B0GU03 582 aa16.46■□□□□ 0.23
SREBF1-214ENST00000486311 DFFBO76075 338 aa16.46■□□□□ 0.23
SREBF1-214ENST00000486311 ENY2Q9NPA8 101 aa16.46■□□□□ 0.23
SREBF1-214ENST00000486311 IGHV3-66A0A0C4DH42 116 aa16.45■□□□□ 0.22
SREBF1-214ENST00000486311 FAM240BA0A1B0GVZ2 78 aa16.45■□□□□ 0.22
SREBF1-214ENST00000486311 CLN5O75503 358 aa16.45■□□□□ 0.22
SREBF1-214ENST00000486311 RBMS2Q15434 407 aaKnown RBP16.45■□□□□ 0.22
SREBF1-214ENST00000486311 SURF2Q15527 256 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-214ENST00000486311 BSXQ3C1V8 233 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms