RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 FNDC4Q9H6D8 234 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-206ENST00000485870 NDUFA13Q9P0J0 144 aa13.82□□□□□ -0.2
COL1A1-206ENST00000485870 SHPKQ9UHJ6 478 aa13.82□□□□□ -0.2
COL1A1-206ENST00000485870 TRAV25A0A0B4J276 109 aa13.81□□□□□ -0.2
COL1A1-206ENST00000485870 C15orf62A8K5M9 175 aa13.81□□□□□ -0.2
COL1A1-206ENST00000485870 K7EMT4 169 aa13.81□□□□□ -0.2
COL1A1-206ENST00000485870 HTR2BP41595 481 aa13.81□□□□□ -0.2
COL1A1-206ENST00000485870 SMCO1Q147U7 214 aa13.81□□□□□ -0.2
COL1A1-206ENST00000485870 MLANAQ16655 118 aa13.81□□□□□ -0.2
COL1A1-206ENST00000485870 HAGHQ16775 308 aa13.81□□□□□ -0.2
COL1A1-206ENST00000485870 TMEM128Q5BJH2 165 aa13.81□□□□□ -0.2
COL1A1-206ENST00000485870 NMSQ5H8A3 153 aa13.81□□□□□ -0.2
COL1A1-206ENST00000485870 SRD5A3Q9H8P0 318 aa13.81□□□□□ -0.2
COL1A1-206ENST00000485870 MRPL36Q9P0J6 103 aaKnown RBP13.81□□□□□ -0.2
COL1A1-206ENST00000485870 IGHV3-49A0A0A0MS15 119 aa13.8□□□□□ -0.2
COL1A1-206ENST00000485870 LINC00854A0A1B0GVQ3 168 aa13.8□□□□□ -0.2
COL1A1-206ENST00000485870 CCR6P51684 374 aa13.8□□□□□ -0.2
COL1A1-206ENST00000485870 TMEM50AO95807 157 aa13.79□□□□□ -0.2
COL1A1-206ENST00000485870 RBMS2Q15434 407 aaKnown RBP13.79□□□□□ -0.2
COL1A1-206ENST00000485870 ANKRD55Q3KP44 614 aa13.79□□□□□ -0.2
COL1A1-206ENST00000485870 LAMTOR1Q6IAA8 161 aa13.79□□□□□ -0.2
COL1A1-206ENST00000485870 CENPSQ8N2Z9 138 aa13.79□□□□□ -0.2
COL1A1-206ENST00000485870 SLC24A4Q8NFF2 622 aa13.79□□□□□ -0.2
COL1A1-206ENST00000485870 OR10C1Q96KK4 312 aa13.79□□□□□ -0.2
COL1A1-206ENST00000485870 SDHCQ99643 169 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-206ENST00000485870 HIPK2Q9H2X6 1198 aa13.79□□□□□ -0.2
COL1A1-206ENST00000485870 CACFD1Q9UGQ2 172 aa13.79□□□□□ -0.2
COL1A1-206ENST00000485870 SMPXQ9UHP9 88 aa13.79□□□□□ -0.2
COL1A1-206ENST00000485870 IGHV7-4-1A0A0J9YVY3 117 aa13.78□□□□□ -0.2
COL1A1-206ENST00000485870 RBMY1BA6NDE4 496 aaKnown RBP13.78□□□□□ -0.2
COL1A1-206ENST00000485870 RBMY1EA6NEQ0 496 aaKnown RBP13.78□□□□□ -0.2
COL1A1-206ENST00000485870 TSPAN4O14817 238 aa13.78□□□□□ -0.2
COL1A1-206ENST00000485870 SFT2D2O95562 160 aa13.78□□□□□ -0.2
COL1A1-206ENST00000485870 RBMY1DP0C7P1 496 aaKnown RBP13.78□□□□□ -0.2
COL1A1-206ENST00000485870 TNFRSF9Q07011 255 aa13.78□□□□□ -0.2
COL1A1-206ENST00000485870 PPP1R1AQ13522 171 aa13.78□□□□□ -0.2
COL1A1-206ENST00000485870 C2orf83Q53S99 150 aa13.78□□□□□ -0.2
COL1A1-206ENST00000485870 TOMM20LQ6UXN7 152 aa13.78□□□□□ -0.2
COL1A1-206ENST00000485870 TMEM116Q8NCL8 245 aa13.78□□□□□ -0.2
COL1A1-206ENST00000485870 OR1S1Q8NH92 325 aa13.78□□□□□ -0.2
COL1A1-206ENST00000485870 SPAG8Q99932 426 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-206ENST00000485870 RHPN1-AS1Q9BWJ2 59 aa13.78□□□□□ -0.2
COL1A1-206ENST00000485870 HSPB7Q9UBY9 170 aa13.78□□□□□ -0.2
COL1A1-206ENST00000485870 PUS1Q9Y606 427 aaKnown RBP eCLIP13.78□□□□□ -0.2
COL1A1-206ENST00000485870 IGHV3OR16-13A0A075B7E8 117 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 TRAV14DV4A0A0A6YYC5 116 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 IGHV3-74A0A0B4J1X5 117 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 RPS10-NUDT3A0A1W2PQS6 291 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 NAP1L6A6NFF2 107 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 CHEK1O14757 476 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 CLN5O75503 358 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 NPY1RP25929 384 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 LINC00322Q6ZN03 302 aaPredicted RBP13.77□□□□□ -0.21
COL1A1-206ENST00000485870 ZNF600Q6ZNG1 722 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 OR4X1Q8NH49 305 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 DTD1Q8TEA8 209 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 TMEM170AQ8WVE7 144 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 RNF2Q99496 336 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 SPATA25Q9BR10 227 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 GINS3Q9BRX5 216 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 RBKSQ9H477 322 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 NBEAL2Q6ZNJ1 2754 aa13.77□□□□□ -0.21
COL1A1-206ENST00000485870 PIGBOS1A0A0B4J2F0 54 aa13.76□□□□□ -0.21
COL1A1-206ENST00000485870 A0A1B0GU03 582 aa13.76□□□□□ -0.21
COL1A1-206ENST00000485870 DUXBA0A1W2PPF3 345 aa13.76□□□□□ -0.21
COL1A1-206ENST00000485870 IFNA10P01566 189 aa13.76□□□□□ -0.21
COL1A1-206ENST00000485870 RNASEH2CQ8TDP1 164 aaKnown RBP13.76□□□□□ -0.21
COL1A1-206ENST00000485870 UBQLN2Q9UHD9 624 aa13.76□□□□□ -0.21
COL1A1-206ENST00000485870 SCGB2A1O75556 95 aa13.75□□□□□ -0.21
COL1A1-206ENST00000485870 NDUFB6O95139 128 aa13.75□□□□□ -0.21
COL1A1-206ENST00000485870 IL7P13232 177 aa13.75□□□□□ -0.21
COL1A1-206ENST00000485870 RND2P52198 227 aa13.75□□□□□ -0.21
COL1A1-206ENST00000485870 TIGITQ495A1 244 aa13.75□□□□□ -0.21
COL1A1-206ENST00000485870 LRTM2Q8N967 370 aa13.75□□□□□ -0.21
COL1A1-206ENST00000485870 ZFAND3Q9H8U3 227 aa13.75□□□□□ -0.21
COL1A1-206ENST00000485870 RETNQ9HD89 108 aa13.75□□□□□ -0.21
COL1A1-206ENST00000485870 FLVCR2Q9UPI3 526 aa13.75□□□□□ -0.21
COL1A1-206ENST00000485870 IGKV3-7A0A075B6H7 116 aa13.74□□□□□ -0.21
COL1A1-206ENST00000485870 PRSS54Q6PEW0 395 aa13.74□□□□□ -0.21
COL1A1-206ENST00000485870 NOXA1Q86UR1 476 aa13.74□□□□□ -0.21
COL1A1-206ENST00000485870 DNAH7Q8WXX0 4024 aa13.74□□□□□ -0.21
COL1A1-206ENST00000485870 IGHV3-66A0A0C4DH42 116 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 OR4C46A6NHA9 309 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 CENPXA8MT69 81 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 PITX3O75364 302 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 IGKV1-17P01599 117 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 APOHP02749 345 aaPredicted RBP13.73□□□□□ -0.21
COL1A1-206ENST00000485870 HOXB5P09067 269 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 SLC25A4P12235 298 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 BTCP35070 178 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 TFPI2P48307 235 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 UBE2MP61081 183 aaKnown RBP13.73□□□□□ -0.21
COL1A1-206ENST00000485870 ST8SIA2Q92186 375 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 CITED4Q96RK1 184 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 U3KQ87 197 aa13.73□□□□□ -0.21
COL1A1-206ENST00000485870 KMT2CQ8NEZ4 4911 aaKnown RBP13.73□□□□□ -0.21
COL1A1-206ENST00000485870 TRAV30A0A087WSZ9 112 aa13.72□□□□□ -0.21
COL1A1-206ENST00000485870 C9orf170A2RU37 121 aa13.72□□□□□ -0.21
COL1A1-206ENST00000485870 IAPPP10997 89 aa13.72□□□□□ -0.21
COL1A1-206ENST00000485870 OR10J1P30954 320 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms