RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 ZNF701M0R085 212 aaPredicted RBP12.63□□□□□ -0.39
SMC4-216ENST00000485645 TNFSF8P32971 234 aa12.63□□□□□ -0.39
SMC4-216ENST00000485645 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMC4-216ENST00000485645 COPZ2Q9P299 210 aa12.63□□□□□ -0.39
SMC4-216ENST00000485645 ST8SIA3O43173 380 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 P0C879 139 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 TRIM16LQ309B1 348 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 STEAP1BQ6NZ63 245 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 ZNF600Q6ZNG1 722 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 OR4D10Q8NGI6 311 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 ZFAND1Q8TCF1 268 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 GATAD1Q8WUU5 269 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 ST8SIA2Q92186 375 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 RARRES2Q99969 163 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 SOSTQ9BQB4 213 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 VSIRQ9H7M9 311 aa12.62□□□□□ -0.39
SMC4-216ENST00000485645 PUS1Q9Y606 427 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMC4-216ENST00000485645 FABP12A6NFH5 140 aa12.61□□□□□ -0.39
SMC4-216ENST00000485645 DNASE2O00115 360 aaPredicted RBP12.61□□□□□ -0.39
SMC4-216ENST00000485645 CORTO00230 105 aa12.61□□□□□ -0.39
SMC4-216ENST00000485645 GSTZ1O43708 216 aaPredicted RBP12.61□□□□□ -0.39
SMC4-216ENST00000485645 RAB3DO95716 219 aa12.61□□□□□ -0.39
SMC4-216ENST00000485645 TMEM50AO95807 157 aa12.61□□□□□ -0.39
SMC4-216ENST00000485645 ETV6P41212 452 aa12.61□□□□□ -0.39
SMC4-216ENST00000485645 HOXA1P49639 335 aaPredicted RBP12.61□□□□□ -0.39
SMC4-216ENST00000485645 PPP5CP53041 499 aa12.61□□□□□ -0.39
SMC4-216ENST00000485645 CCDC71LQ8N9Z2 235 aa12.61□□□□□ -0.39
SMC4-216ENST00000485645 TERB2Q8NHR7 220 aa12.61□□□□□ -0.39
SMC4-216ENST00000485645 RRNAD1Q96FB5 475 aaKnown RBP12.61□□□□□ -0.39
SMC4-216ENST00000485645 ENY2Q9NPA8 101 aa12.61□□□□□ -0.39
SMC4-216ENST00000485645 IGHV3-66A0A0C4DH42 116 aa12.6□□□□□ -0.39
SMC4-216ENST00000485645 DFFBO76075 338 aa12.6□□□□□ -0.39
SMC4-216ENST00000485645 APOHP02749 345 aaPredicted RBP12.6□□□□□ -0.39
SMC4-216ENST00000485645 RNASE2P10153 161 aaKnown RBP12.6□□□□□ -0.39
SMC4-216ENST00000485645 RPL11P62913 178 aaKnown RBP12.6□□□□□ -0.39
SMC4-216ENST00000485645 MEF2DQ14814 521 aa12.6□□□□□ -0.39
SMC4-216ENST00000485645 SP6Q3SY56 376 aa12.6□□□□□ -0.39
SMC4-216ENST00000485645 SCGB2B2Q4G0G5 96 aa12.6□□□□□ -0.39
SMC4-216ENST00000485645 PVRIGQ6DKI7 326 aa12.6□□□□□ -0.39
SMC4-216ENST00000485645 LILRB2Q8N423 598 aa12.6□□□□□ -0.39
SMC4-216ENST00000485645 MS4A6AQ9H2W1 248 aa12.6□□□□□ -0.39
SMC4-216ENST00000485645 TMEM231Q9H6L2 316 aa12.6□□□□□ -0.39
SMC4-216ENST00000485645 ZFAND3Q9H8U3 227 aa12.6□□□□□ -0.39
SMC4-216ENST00000485645 KMT2AQ03164 3969 aa12.6□□□□□ -0.39
SMC4-216ENST00000485645 B3GALNT1O75752 331 aa12.59□□□□□ -0.39
SMC4-216ENST00000485645 UCP1P25874 307 aa12.59□□□□□ -0.39
SMC4-216ENST00000485645 OR13C8Q8NGS7 320 aa12.59□□□□□ -0.39
SMC4-216ENST00000485645 RNASE11Q8TAA1 199 aaKnown RBP12.59□□□□□ -0.39
SMC4-216ENST00000485645 PHLDA1Q8WV24 401 aaPredicted RBP12.59□□□□□ -0.39
SMC4-216ENST00000485645 TRAV2A0A0B4J234 112 aa12.58□□□□□ -0.4
SMC4-216ENST00000485645 A0A1B0GU03 582 aa12.58□□□□□ -0.4
SMC4-216ENST00000485645 A0A1W2PS18 150 aa12.58□□□□□ -0.4
SMC4-216ENST00000485645 CLN5O75503 358 aa12.58□□□□□ -0.4
SMC4-216ENST00000485645 SCGB2A1O75556 95 aa12.58□□□□□ -0.4
SMC4-216ENST00000485645 AKAIN1P0CW23 69 aa12.58□□□□□ -0.4
SMC4-216ENST00000485645 NPPCP23582 126 aa12.58□□□□□ -0.4
SMC4-216ENST00000485645 OPRK1P41145 380 aa12.58□□□□□ -0.4
SMC4-216ENST00000485645 DEFB131AP59861 70 aa12.58□□□□□ -0.4
SMC4-216ENST00000485645 OR11H2Q8NH07 326 aa12.58□□□□□ -0.4
SMC4-216ENST00000485645 MARCH1Q8TCQ1 289 aa12.58□□□□□ -0.4
SMC4-216ENST00000485645 A0A0G2JRQ6 117 aa12.57□□□□□ -0.4
SMC4-216ENST00000485645 ANKRD20A5PA0PJZ0 165 aa12.57□□□□□ -0.4
SMC4-216ENST00000485645 CA1P00915 261 aaPredicted RBP12.57□□□□□ -0.4
SMC4-216ENST00000485645 S100A5P33763 92 aa12.57□□□□□ -0.4
SMC4-216ENST00000485645 LEMD1Q68G75 181 aa12.57□□□□□ -0.4
SMC4-216ENST00000485645 FAAP20Q6NZ36 180 aa12.57□□□□□ -0.4
SMC4-216ENST00000485645 OR4C16Q8NGL9 310 aa12.57□□□□□ -0.4
SMC4-216ENST00000485645 OR4X1Q8NH49 305 aa12.57□□□□□ -0.4
SMC4-216ENST00000485645 METTL26Q96S19 204 aa12.57□□□□□ -0.4
SMC4-216ENST00000485645 FNDC4Q9H6D8 234 aaPredicted RBP12.57□□□□□ -0.4
SMC4-216ENST00000485645 RABAC1Q9UI14 185 aa12.57□□□□□ -0.4
SMC4-216ENST00000485645 DISC1C4P0D8 188 aa12.56□□□□□ -0.4
SMC4-216ENST00000485645 MLANAQ16655 118 aa12.56□□□□□ -0.4
SMC4-216ENST00000485645 Q6ZRM9 215 aa12.56□□□□□ -0.4
SMC4-216ENST00000485645 FAM219AQ8IW50 185 aa12.56□□□□□ -0.4
SMC4-216ENST00000485645 C11orf45Q8TAV5 145 aa12.56□□□□□ -0.4
SMC4-216ENST00000485645 TMEM230Q96A57 120 aa12.56□□□□□ -0.4
SMC4-216ENST00000485645 MFFQ9GZY8 342 aa12.56□□□□□ -0.4
SMC4-216ENST00000485645 TMEM222Q9H0R3 208 aa12.56□□□□□ -0.4
SMC4-216ENST00000485645 C11orf68Q9H3H3 251 aaKnown RBP12.56□□□□□ -0.4
SMC4-216ENST00000485645 MRPL36Q9P0J6 103 aaKnown RBP12.56□□□□□ -0.4
SMC4-216ENST00000485645 C14orf166Q9Y224 244 aaKnown RBP12.56□□□□□ -0.4
SMC4-216ENST00000485645 CDS2O95674 445 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 OR5AC1P0C628 307 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 SPCS3P61009 180 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 TMEM187Q14656 261 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 BSXQ3C1V8 233 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 CCDC190Q86UF4 302 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 STHQ8IWL8 128 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 FAM24BQ8N5W8 94 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 OR52E5Q8NH55 327 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 NARS2Q96I59 477 aaKnown RBP12.55□□□□□ -0.4
SMC4-216ENST00000485645 PRRT1Q99946 306 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.55□□□□□ -0.4
SMC4-216ENST00000485645 NDUFA13Q9P0J0 144 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 V9GYH0 126 aa12.55□□□□□ -0.4
SMC4-216ENST00000485645 TRAV30A0A087WSZ9 112 aa12.54□□□□□ -0.4
SMC4-216ENST00000485645 TEX13DA0A0J9YY54 714 aaPredicted RBP12.54□□□□□ -0.4
SMC4-216ENST00000485645 RPS10-NUDT3A0A1W2PQS6 291 aa12.54□□□□□ -0.4
SMC4-216ENST00000485645 IFNA4P05014 189 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms