RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 FOLR2P14207 255 aa13.49□□□□□ -0.25
SREBF1-213ENST00000485080 NPY1RP25929 384 aa13.49□□□□□ -0.25
SREBF1-213ENST00000485080 RELQ04864 619 aaPredicted RBP13.49□□□□□ -0.25
SREBF1-213ENST00000485080 UNQ9165/PRO28630Q6UXU0 137 aa13.49□□□□□ -0.25
SREBF1-213ENST00000485080 OR4X1Q8NH49 305 aa13.49□□□□□ -0.25
SREBF1-213ENST00000485080 MRAPQ8TCY5 172 aa13.49□□□□□ -0.25
SREBF1-213ENST00000485080 ZNF414Q96IQ9 312 aa13.49□□□□□ -0.25
SREBF1-213ENST00000485080 FNDC4Q9H6D8 234 aaPredicted RBP13.49□□□□□ -0.25
SREBF1-213ENST00000485080 TECRQ9NZ01 308 aaKnown RBP13.49□□□□□ -0.25
SREBF1-213ENST00000485080 UFC1Q9Y3C8 167 aa13.49□□□□□ -0.25
SREBF1-213ENST00000485080 TRAV6A0A075B6T7 132 aa13.48□□□□□ -0.25
SREBF1-213ENST00000485080 RPS10-NUDT3A0A1W2PQS6 291 aa13.48□□□□□ -0.25
SREBF1-213ENST00000485080 K7EMT4 169 aa13.48□□□□□ -0.25
SREBF1-213ENST00000485080 IFNA21P01568 189 aa13.48□□□□□ -0.25
SREBF1-213ENST00000485080 SPNP16150 400 aa13.48□□□□□ -0.25
SREBF1-213ENST00000485080 CBLN1P23435 193 aa13.48□□□□□ -0.25
SREBF1-213ENST00000485080 UBAC2Q8NBM4 344 aa13.48□□□□□ -0.25
SREBF1-213ENST00000485080 CIB3Q96Q77 187 aaPredicted RBP13.48□□□□□ -0.25
SREBF1-213ENST00000485080 ZC4H2Q9NQZ6 224 aa13.48□□□□□ -0.25
SREBF1-213ENST00000485080 LSM4Q9Y4Z0 139 aaKnown RBP13.48□□□□□ -0.25
SREBF1-213ENST00000485080 ZNF320A2RRD8 509 aa13.47□□□□□ -0.25
SREBF1-213ENST00000485080 GNG7O60262 68 aa13.47□□□□□ -0.25
SREBF1-213ENST00000485080 ADAP1O75689 374 aa13.47□□□□□ -0.25
SREBF1-213ENST00000485080 IL5P05113 134 aa13.47□□□□□ -0.25
SREBF1-213ENST00000485080 SLC25A4P12235 298 aa13.47□□□□□ -0.25
SREBF1-213ENST00000485080 OPRK1P41145 380 aa13.47□□□□□ -0.25
SREBF1-213ENST00000485080 ID3Q02535 119 aa13.47□□□□□ -0.25
SREBF1-213ENST00000485080 TMEM116Q8NCL8 245 aa13.47□□□□□ -0.25
SREBF1-213ENST00000485080 ZNF431Q8TF32 576 aaPredicted RBP13.47□□□□□ -0.25
SREBF1-213ENST00000485080 MRPL27Q9P0M9 148 aaKnown RBP13.47□□□□□ -0.25
SREBF1-213ENST00000485080 C15orf62A8K5M9 175 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 CLN5O75503 358 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 NXPH3O95157 252 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 TMEM50AO95807 157 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 IGHV3-48P01763 117 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 GP9P14770 177 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 DEFB114Q30KQ6 69 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 ETFRF1Q6IPR1 90 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 LCN12Q6JVE5 192 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 OR52B4Q8NGK2 314 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 ENKURQ8TC29 256 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 OR10C1Q96KK4 312 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 PRR25Q96S07 402 aa13.46□□□□□ -0.25
SREBF1-213ENST00000485080 DAZ1Q9NQZ3 744 aaKnown RBP13.46□□□□□ -0.25
SREBF1-213ENST00000485080 IGHV3-35A0A0C4DH35 117 aa13.45□□□□□ -0.26
SREBF1-213ENST00000485080 MPTX1A8MV57 137 aa13.45□□□□□ -0.26
SREBF1-213ENST00000485080 SYNGR2O43760 224 aa13.45□□□□□ -0.26
SREBF1-213ENST00000485080 IFNA10P01566 189 aa13.45□□□□□ -0.26
SREBF1-213ENST00000485080 MLANAQ16655 118 aa13.45□□□□□ -0.26
SREBF1-213ENST00000485080 TM4SF20Q53R12 229 aa13.45□□□□□ -0.26
SREBF1-213ENST00000485080 PRSS54Q6PEW0 395 aa13.45□□□□□ -0.26
SREBF1-213ENST00000485080 OR4D5Q8NGN0 318 aa13.45□□□□□ -0.26
SREBF1-213ENST00000485080 MRPL36Q9P0J6 103 aaKnown RBP13.45□□□□□ -0.26
SREBF1-213ENST00000485080 TRAV30A0A087WSZ9 112 aa13.44□□□□□ -0.26
SREBF1-213ENST00000485080 GPX4P36969 197 aaPredicted RBP13.44□□□□□ -0.26
SREBF1-213ENST00000485080 DEFA1P59665 94 aa13.44□□□□□ -0.26
SREBF1-213ENST00000485080 DEFA3P59666 94 aa13.44□□□□□ -0.26
SREBF1-213ENST00000485080 CD300EQ496F6 205 aaPredicted RBP13.44□□□□□ -0.26
SREBF1-213ENST00000485080 C11orf87Q6NUJ2 197 aa13.44□□□□□ -0.26
SREBF1-213ENST00000485080 NRARPQ7Z6K4 114 aa13.44□□□□□ -0.26
SREBF1-213ENST00000485080 HAPLN4Q86UW8 402 aa13.44□□□□□ -0.26
SREBF1-213ENST00000485080 UXS1Q8NBZ7 420 aa13.44□□□□□ -0.26
SREBF1-213ENST00000485080 CACNG8Q8WXS5 425 aa13.44□□□□□ -0.26
SREBF1-213ENST00000485080 SCGB2A1O75556 95 aa13.43□□□□□ -0.26
SREBF1-213ENST00000485080 NKX2-1P43699 371 aaPredicted RBP13.43□□□□□ -0.26
SREBF1-213ENST00000485080 RPP30P78346 268 aaKnown RBP13.43□□□□□ -0.26
SREBF1-213ENST00000485080 CD69Q07108 199 aa13.43□□□□□ -0.26
SREBF1-213ENST00000485080 ZNF600Q6ZNG1 722 aa13.43□□□□□ -0.26
SREBF1-213ENST00000485080 DYNLRB2Q8TF09 96 aa13.43□□□□□ -0.26
SREBF1-213ENST00000485080 SEC22CQ9BRL7 303 aa13.43□□□□□ -0.26
SREBF1-213ENST00000485080 MARVELD1Q9BSK0 173 aa13.43□□□□□ -0.26
SREBF1-213ENST00000485080 BOLA1Q9Y3E2 137 aa13.43□□□□□ -0.26
SREBF1-213ENST00000485080 COL7A1Q02388 2944 aa13.42□□□□□ -0.26
SREBF1-213ENST00000485080 TRAV25A0A0B4J276 109 aa13.42□□□□□ -0.26
SREBF1-213ENST00000485080 IZUMO1RA6ND01 250 aa13.42□□□□□ -0.26
SREBF1-213ENST00000485080 IGKV1-17P01599 117 aa13.42□□□□□ -0.26
SREBF1-213ENST00000485080 EDN2P20800 178 aa13.42□□□□□ -0.26
SREBF1-213ENST00000485080 RAB11AP62491 216 aa13.42□□□□□ -0.26
SREBF1-213ENST00000485080 IAH1Q2TAA2 248 aaPredicted RBP13.42□□□□□ -0.26
SREBF1-213ENST00000485080 C12orf45Q8N5I9 185 aaPredicted RBP13.42□□□□□ -0.26
SREBF1-213ENST00000485080 ZBTB8BQ8NAP8 495 aaPredicted RBP13.42□□□□□ -0.26
SREBF1-213ENST00000485080 OR1S2Q8NGQ3 325 aa13.42□□□□□ -0.26
SREBF1-213ENST00000485080 MLXQ9UH92 298 aa13.42□□□□□ -0.26
SREBF1-213ENST00000485080 ZNF785A8K8V0 405 aa13.41□□□□□ -0.26
SREBF1-213ENST00000485080 PRAF2O60831 178 aa13.41□□□□□ -0.26
SREBF1-213ENST00000485080 IFNA4P05014 189 aa13.41□□□□□ -0.26
SREBF1-213ENST00000485080 IGLC1P0CG04 106 aa13.41□□□□□ -0.26
SREBF1-213ENST00000485080 IAPPP10997 89 aa13.41□□□□□ -0.26
SREBF1-213ENST00000485080 DEFB121Q5J5C9 76 aa13.41□□□□□ -0.26
SREBF1-213ENST00000485080 TOMM20LQ6UXN7 152 aa13.41□□□□□ -0.26
SREBF1-213ENST00000485080 Q8N1Y9 231 aa13.41□□□□□ -0.26
SREBF1-213ENST00000485080 MAGT1Q9H0U3 335 aa13.41□□□□□ -0.26
SREBF1-213ENST00000485080 SNRPGP15A8MWD9 76 aa13.4□□□□□ -0.26
SREBF1-213ENST00000485080 WRBO00258 174 aa13.4□□□□□ -0.26
SREBF1-213ENST00000485080 RND2P52198 227 aa13.4□□□□□ -0.26
SREBF1-213ENST00000485080 YPEL3P61236 119 aaPredicted RBP13.4□□□□□ -0.26
SREBF1-213ENST00000485080 POLR2GP62487 172 aaKnown RBP eCLIP13.4□□□□□ -0.26
SREBF1-213ENST00000485080 SLC16A13Q7RTY0 426 aa13.4□□□□□ -0.26
SREBF1-213ENST00000485080 SMIM8Q96KF7 97 aa13.4□□□□□ -0.26
SREBF1-213ENST00000485080 B9D2Q9BPU9 175 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms