RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 TMEM179BQ7Z7N9 219 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 TMEM219Q86XT9 240 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 CBR4Q8N4T8 237 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 OR13A1Q8NGR1 328 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 TCTEX1D2Q8WW35 142 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 TMED6Q8WW62 240 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 RNF166Q96A37 237 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-205ENST00000485055 ISG20L2Q9H9L3 353 aaKnown RBP4.13□□□□□ -1.75
CCDC39-205ENST00000485055 COMMD9Q9P000 198 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 CTSZQ9UBR2 303 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 POMPQ9Y244 141 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 FBN3Q75N90 2809 aa4.13□□□□□ -1.75
CCDC39-205ENST00000485055 IGHV1-69DA0A0B4J2H0 117 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 LOC100130705A0A1B0GUX0 176 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 C17orf98A8MV24 154 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 MOSP00540 346 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 P01737 135 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 IGHV1-69P01742 117 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 MYL12AP19105 171 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 HOXA4Q00056 320 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-205ENST00000485055 JOSD1Q15040 202 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-205ENST00000485055 EXOC3-AS1Q8N2X6 119 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 DCUN1D4Q92564 292 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 CCL17Q92583 94 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 FAM19A4Q96LR4 140 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 RDH12Q96NR8 316 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 ADAT1Q9BUB4 502 aaKnown RBP4.12□□□□□ -1.75
CCDC39-205ENST00000485055 GNB1LQ9BYB4 327 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 RPUSD1Q9UJJ7 312 aaKnown RBP4.12□□□□□ -1.75
CCDC39-205ENST00000485055 ZNF580Q9UK33 172 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 RAB22AQ9UL26 194 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 ABCA1O95477 2261 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 LOC100131303A0A0U1RQF7 123 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 DNAJC9-AS1A6NH13 148 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 ZNF705EA8MWA4 302 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-205ENST00000485055 CCL25O15444 150 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 ALPLP05186 524 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 OR5H8P0DN80 308 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 MED14OSP0DP75 135 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 SPNP16150 400 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 BTCP35070 178 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 KIR2DS2P43631 304 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 DAPP51397 102 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 RPS20P60866 119 aaKnown RBP4.12□□□□□ -1.75
CCDC39-205ENST00000485055 GNB2P62879 340 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 ODF3L2Q3SX64 289 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 OR2T27Q8NH04 317 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 FGF23Q9GZV9 251 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-205ENST00000485055 CST9LQ9H4G1 147 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 TRAPPC2LQ9UL33 140 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 ZNF257Q9Y2Q1 563 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 R4GMQ9 66 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 DNHD1Q96M86 4753 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 IGKV1D-13A0A0B4J2D9 117 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 A0A1B0GW64 132 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 TMEM189A5PLL7 270 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 F5H5P2 479 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 H3BP45 60 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 J3QT63 122 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 MPPED1O15442 326 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 IGKV1-13P0DP09 117 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 AMTP48728 403 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 PPP3R1P63098 170 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 ZNF260Q3ZCT1 412 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 DNLZQ5SXM8 178 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 LDLRAD2Q5SZI1 272 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 AVPI1Q5T686 147 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 HCP5Q6MZN7 132 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 GOLT1AQ6ZVE7 132 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 BAP18Q8IXM2 172 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 Q8N7P7 452 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 ZNRF1Q8ND25 227 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 OR13C8Q8NGS7 320 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 OR10R2Q8NGX6 335 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 OSR1Q8TAX0 266 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-205ENST00000485055 MBD3L1Q8WWY6 194 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 FMC1Q96HJ9 113 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 GAFA1Q96PS6 74 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 GPER1Q99527 375 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 HSPB9Q9BQS6 159 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 TMEM222Q9H0R3 208 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 MMP26Q9NRE1 261 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 GLS2Q9UI32 602 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 LAMTOR2Q9Y2Q5 125 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 ORC6Q9Y5N6 252 aa4.12□□□□□ -1.75
CCDC39-205ENST00000485055 ODF3BA8MYP8 253 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 INMT-MINDY4F8WBC2 141 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 CORTO00230 105 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 ECSCRQ19T08 205 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 Q8IYB0 196 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 OR8I2Q8N0Y5 310 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 C11orf42Q8N5U0 333 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 SIGLECL1Q8N7X8 197 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 OR11H6Q8NGC7 330 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 AQP3Q92482 292 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 HIST1H2BAQ96A08 127 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 TMEM101Q96IK0 257 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 NRIP2Q9BQI9 281 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 ZNF556Q9HAH1 456 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms