RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 UQCC1Q9NVA1 299 aa3.41□□□□□ -1.86
SPTA1-206ENST00000484520 MED9Q9NWA0 146 aa3.41□□□□□ -1.86
SPTA1-206ENST00000484520 METTL1Q9UBP6 276 aaKnown RBP3.41□□□□□ -1.86
SPTA1-206ENST00000484520 FBXL17Q9UF56 701 aa3.41□□□□□ -1.86
SPTA1-206ENST00000484520 RNF24Q9Y225 148 aa3.41□□□□□ -1.86
SPTA1-206ENST00000484520 TCF19Q9Y242 345 aa3.41□□□□□ -1.86
SPTA1-206ENST00000484520 SIGLEC9Q9Y336 463 aa3.41□□□□□ -1.86
SPTA1-206ENST00000484520 TIMM9Q9Y5J7 89 aa3.41□□□□□ -1.86
SPTA1-206ENST00000484520 NBASA2RRP1 2371 aa3.41□□□□□ -1.86
SPTA1-206ENST00000484520 HEATR1Q9H583 2144 aaKnown RBP3.41□□□□□ -1.86
SPTA1-206ENST00000484520 CHD3Q12873 2000 aaKnown RBP3.41□□□□□ -1.86
SPTA1-206ENST00000484520 DCHS2Q6V1P9 2916 aa3.4□□□□□ -1.86
SPTA1-206ENST00000484520 A0A096LNT2 108 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 A0A0G2JRQ6 117 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 CENPVL3A0A0U1RRI6 287 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 IGSF23A1L1A6 192 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 MSGN1A6NI15 193 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 FAM157AC9JC47 383 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 PRYO14603 147 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 SLC25A17O43808 307 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 IGKV1D-33P01593 117 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 IGKV1-33P01594 117 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 IGLV2-23P01705 113 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 HLA-DRB1P01911 266 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 IFNA4P05014 189 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 CRYGBP07316 175 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 OR9G9P0C7N8 305 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 SPP1P10451 314 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 HIST1H1BP16401 226 aaKnown RBP3.4□□□□□ -1.87
SPTA1-206ENST00000484520 TMEM11P17152 192 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 TAGLN2P37802 199 aaKnown RBP3.4□□□□□ -1.87
SPTA1-206ENST00000484520 VDAC2P45880 294 aaPredicted RBP3.4□□□□□ -1.87
SPTA1-206ENST00000484520 RPL27AP46776 148 aaKnown RBP3.4□□□□□ -1.87
SPTA1-206ENST00000484520 PAX9P55771 341 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 DLK1P80370 383 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 SLC38A11Q08AI6 406 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 HES1Q14469 280 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 SSX2Q16385 188 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 C5orf64Q2M2E5 130 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 LRRC75BQ2VPJ9 315 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 TMEM249Q2WGJ8 235 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 BSXQ3C1V8 233 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 FAM53AQ6NSI3 398 aaPredicted RBP3.4□□□□□ -1.87
SPTA1-206ENST00000484520 ZNF562Q6V9R5 426 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 SSX9Q7RTT3 188 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 PDZD9Q8IXQ8 264 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 Q8N6K4 173 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 LFNGQ8NES3 379 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 OR5C1Q8NGR4 320 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 OR2G3Q8NGZ4 309 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 OR1P1Q8NH06 330 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 ATP6V0BQ99437 205 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 RASL11BQ9BPW5 248 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 C19orf24Q9BVV8 132 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 MAGT1Q9H0U3 335 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 ZNF430Q9H8G1 570 aaPredicted RBP3.4□□□□□ -1.87
SPTA1-206ENST00000484520 MMP26Q9NRE1 261 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 PLSCR3Q9NRY6 295 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 THYN1Q9P016 225 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 MOB4Q9Y3A3 225 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 HILPDAQ9Y5L2 63 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 CSMD1Q96PZ7 3565 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 SPTBN1Q01082 2364 aaKnown RBP3.4□□□□□ -1.87
SPTA1-206ENST00000484520 DIDO1Q9BTC0 2240 aaKnown RBP3.4□□□□□ -1.87
SPTA1-206ENST00000484520 LRBAP50851 2863 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 ICE1Q9Y2F5 2266 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 FBN2P35556 2912 aa3.4□□□□□ -1.87
SPTA1-206ENST00000484520 ARFGEF3Q5TH69 2177 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 TRAV40A0A0B4J280 105 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 TEX50A0A1B0GTY4 177 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 FAM24AA6NFZ4 105 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 SRRM4A7MD48 611 aaKnown RBP3.39□□□□□ -1.87
SPTA1-206ENST00000484520 NPIPB5A8MRT5 1133 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 H3BUA1 57 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 CST7O76096 145 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 CNIH1O95406 144 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 BRI3O95415 125 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 TMEM50AO95807 157 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 MT-CO2P00403 227 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 CFDP00746 253 aaPredicted RBP3.39□□□□□ -1.87
SPTA1-206ENST00000484520 TGFAP01135 160 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 HBE1P02100 147 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 PRH1P02810 166 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 METTL15P1P0C7V9 234 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 IGHV4-31P0DP07 118 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 IAPPP10997 89 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 SULT1A2P50226 295 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 PPT1P50897 306 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 RPL15P61313 204 aaKnown RBP3.39□□□□□ -1.87
SPTA1-206ENST00000484520 SELENOTP62341 195 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 IFITM2Q01629 132 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 TMEM267Q0VDI3 215 aaPredicted RBP3.39□□□□□ -1.87
SPTA1-206ENST00000484520 KLRD1Q13241 179 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 CLINT1Q14677 625 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 AKR1C8PQ5T2L2 129 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 PVRIGQ6DKI7 326 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 UQCC3Q6UW78 93 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 IL34Q6ZMJ4 242 aa3.39□□□□□ -1.87
SPTA1-206ENST00000484520 CENPVQ7Z7K6 275 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms