RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 C22orf42Q6IC83 251 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 ZNRF2Q8NHG8 242 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 LGALS14Q8TCE9 139 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 METTL26Q96S19 204 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 RNF167Q9H6Y7 350 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 TMED3Q9Y3Q3 217 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 VPS13BQ7Z7G8 4022 aa7.67□□□□□ -1.18
SMARCC1-205ENST00000483847 TRAV18A0A075B6X5 111 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 TRDV1A0A1B0GX56 115 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 EPM2AB3EWF7 344 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 INAFM2P0DMQ5 153 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 FAM3BP58499 235 aaPredicted RBP7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 HERV-K104P61576 105 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 NUTF2P61970 127 aaKnown RBP7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 PRCDQ00LT1 54 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 OGFRL1Q5TC84 451 aaPredicted RBP7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 TSPAN14Q8NG11 270 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 OR5AP2Q8NGF4 316 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 NDUFB11Q9NX14 153 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 RHBDL2Q9NX52 303 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 DAPK2Q9UIK4 370 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 TPRKBQ9Y3C4 175 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 RFNGQ9Y644 331 aa7.66□□□□□ -1.18
SMARCC1-205ENST00000483847 MEIS3P1A6NDR6 274 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 SMIM9A6NGZ8 99 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 NOTOA8MTQ0 251 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 FAM90A26D6RGX4 464 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 SCGNO76038 276 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 IGKV1-39P01597 117 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 IGKV3-20P01619 116 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 IGKV1D-39P04432 117 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 OXA1LQ15070 435 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 MLANAQ16655 118 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 GDF5OSQ5U4N7 250 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 GLMPQ8WWB7 406 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 SLC25A38Q96DW6 304 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 SEC22AQ96IW7 307 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 TSC22D3Q99576 134 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 ATG101Q9BSB4 218 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 U3KQE9 123 aa7.65□□□□□ -1.18
SMARCC1-205ENST00000483847 J3QL48 77 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 IGKV1-17P01599 117 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 HLA-DRB4P13762 266 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 RFX2P48378 723 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 HSPE1P61604 102 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 ERHP84090 104 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 IZUMO4Q1ZYL8 232 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 TIGITQ495A1 244 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 KCTD21Q4G0X4 260 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 C16orf54Q6UWD8 224 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 PRSS48Q7RTY5 328 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 OR5H6Q8NGV6 325 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 OR4A16Q8NH70 328 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 BORCS5Q969J3 196 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 TMEM230Q96A57 120 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 ZNF2Q9BSG1 426 aaPredicted RBP7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 FXYD6Q9H0Q3 95 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 FNDC4Q9H6D8 234 aaPredicted RBP7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 AUNIPQ9H7T9 357 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 EHFQ9NZC4 300 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 YTHDF2Q9Y5A9 579 aaKnown RBP7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 HLA-DRB4X5D2U9 266 aa7.64□□□□□ -1.19
SMARCC1-205ENST00000483847 UBR4Q5T4S7 5183 aa7.63□□□□□ -1.19
SMARCC1-205ENST00000483847 TEX48A0A1B0GUV7 120 aa7.63□□□□□ -1.19
SMARCC1-205ENST00000483847 CLN5O75503 358 aa7.63□□□□□ -1.19
SMARCC1-205ENST00000483847 PHLDA2Q53GA4 152 aa7.63□□□□□ -1.19
SMARCC1-205ENST00000483847 DHRS11Q6UWP2 260 aa7.63□□□□□ -1.19
SMARCC1-205ENST00000483847 H2BFWTQ7Z2G1 175 aa7.63□□□□□ -1.19
SMARCC1-205ENST00000483847 NARS2Q96I59 477 aaKnown RBP7.63□□□□□ -1.19
SMARCC1-205ENST00000483847 RRP15Q9Y3B9 282 aaKnown RBP7.63□□□□□ -1.19
SMARCC1-205ENST00000483847 FLG2Q5D862 2391 aaPredicted RBP7.63□□□□□ -1.19
SMARCC1-205ENST00000483847 LOC102723971A0A1B0GUV8 181 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 RNASE2P10153 161 aaKnown RBP7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 SNCAP37840 140 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 EIF2B2P49770 351 aaKnown RBP7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 DAD1P61803 113 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 SNRPD3P62318 126 aaKnown RBP7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 TBCEQ15813 527 aaPredicted RBP7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 SFXN4Q6P4A7 337 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 CMTM1Q8IZ96 169 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 C1orf158Q8N1D5 194 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 ZNF709Q8N972 641 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 C15orf53Q8NAA6 179 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 MRGPRFQ96AM1 343 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 KRTAP1-5Q9BYS1 174 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 SLC35B3Q9H1N7 401 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 NRN1Q9NPD7 142 aa7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 TXNL4BQ9NX01 149 aaKnown RBP7.62□□□□□ -1.19
SMARCC1-205ENST00000483847 GPR31O00270 319 aa7.61□□□□□ -1.19
SMARCC1-205ENST00000483847 PMP2P02689 132 aa7.61□□□□□ -1.19
SMARCC1-205ENST00000483847 HNRNPCP07910 306 aaKnown RBP eCLIP7.61□□□□□ -1.19
SMARCC1-205ENST00000483847 AP2S1P53680 142 aaPredicted RBP7.61□□□□□ -1.19
SMARCC1-205ENST00000483847 GSG1LQ6UXU4 331 aa7.61□□□□□ -1.19
SMARCC1-205ENST00000483847 OR4X1Q8NH49 305 aa7.61□□□□□ -1.19
SMARCC1-205ENST00000483847 LINC00588Q9Y4M8 146 aa7.61□□□□□ -1.19
SMARCC1-205ENST00000483847 RPS10-NUDT3A0A1W2PQS6 291 aa7.6□□□□□ -1.19
SMARCC1-205ENST00000483847 NUDT3O95989 172 aa7.6□□□□□ -1.19
SMARCC1-205ENST00000483847 HBE1P02100 147 aa7.6□□□□□ -1.19
SMARCC1-205ENST00000483847 CLEC2LP0C7M8 214 aa7.6□□□□□ -1.19
SMARCC1-205ENST00000483847 OPRK1P41145 380 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms