RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ZNF506Q5JVG8 444 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 TEPPQ6URK8 271 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 PPP1R27Q86WC6 154 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 TEX45Q8NA69 505 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 OR2T6Q8NHC8 308 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 P2RX4Q99571 388 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 C20orf24Q9BUV8 137 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 MRPL36Q9P0J6 103 aaKnown RBP7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 METTL1Q9UBP6 276 aaKnown RBP7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 AMMECR1Q9Y4X0 333 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 PXMP4Q9Y6I8 212 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 IGHV4-61A0A0C4DH41 118 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 IGHV2-70DA0A0C4DH43 119 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 LOC102723971A0A1B0GUV8 181 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 UBE2CO00762 179 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 MPDU1O75352 247 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 OPRK1P41145 380 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 CEBPGP53567 150 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 MFAP2P55001 183 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 GNB1P62873 340 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 TNXAQ16473 311 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 AJUBAQ96IF1 538 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 TBX15Q96SF7 602 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 SEPSECSQ9HD40 501 aaKnown RBP7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 HIVEP1P15822 2718 aa7.06□□□□□ -1.28
CDC42SE1-204ENST00000483763 CTXND1A0A1B0GTU2 59 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 C5orf52A6NGY3 159 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 C17orf112F2Z3M2 114 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 BCL2P10415 239 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 COMPP49747 757 aaPredicted RBP7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 ATP5J2P56134 94 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 ERHP84090 104 aaKnown RBP7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 CD69Q07108 199 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 AKIRIN2Q53H80 203 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 SLC16A13Q7RTY0 426 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 STPG3Q8N7X2 389 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 PERPQ96FX8 193 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 PFDN5Q99471 154 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 KPTNQ9Y664 436 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 TOX4O94842 621 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 HSPB1P04792 205 aaKnown RBP7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 LINC00869P0C866 280 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 PDLIM4P50479 330 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 PRR20EP86478 221 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 PRR20CP86479 221 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 PRR20DP86480 221 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 PRR20BP86481 221 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 PRR20AP86496 221 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 SOHLH1Q5JUK2 328 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 TMEM144Q7Z5S9 345 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 MMD2Q8IY49 270 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 ABHD5Q8WTS1 349 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 SMDT1Q9H4I9 107 aa7.05□□□□□ -1.28
CDC42SE1-204ENST00000483763 IGHV4-30-2A0A087WSY4 118 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 A0A1W2PN81 502 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 SEC14L6B5MCN3 397 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 TEX22C9J3V5 150 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 CHRNA7P36544 502 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 CDC34P49427 236 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 CD81P60033 236 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 MMDQ15546 238 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 ACOT6Q3I5F7 207 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 KHDC3LQ587J8 217 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 SPATA31B1PQ5VZV4 182 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 RBMS3Q6XE24 437 aaKnown RBP7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 KIR3DL3Q8N743 410 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 ACTR3CQ9C0K3 210 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 PUS1Q9Y606 427 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 COLCA2A8K830 154 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 CYB5BO43169 146 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 ACTL6BO94805 426 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 SNRNP70P08621 437 aaKnown RBP7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 RPL27AP46776 148 aaKnown RBP7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 LBHQ53QV2 105 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 AWAT1Q58HT5 328 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 FAM90A2PQ658T7 463 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 PIP4P2Q8N4L2 257 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 C10orf105Q8TEF2 133 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 C2CD4CQ8TF44 421 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 FAM168AQ92567 244 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 ACY3Q96HD9 319 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 TCEAL7Q9BRU2 100 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 SLC45A2Q9UMX9 530 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 RNF24Q9Y225 148 aa7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 NIPBLQ6KC79 2804 aaeCLIP7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 SETD2Q9BYW2 2564 aaPredicted RBP7.04□□□□□ -1.28
CDC42SE1-204ENST00000483763 IGHV3-21A0A0B4J1V1 117 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 FNDC10F2Z333 226 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 FOXH1O75593 365 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 OR10J1P30954 320 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 CEACAM3P40198 252 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 RPL29P47914 159 aaKnown RBP7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 ATP5IP56385 69 aaPredicted RBP7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 RAB5BP61020 215 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 HES1Q14469 280 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 SRSF12Q8WXF0 261 aaKnown RBP7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 FAM103A1Q9BTL3 118 aaKnown RBP7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 IGKV1D-37A0A075B6S9 117 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 C7orf77A4D0Y5 90 aa7.03□□□□□ -1.28
CDC42SE1-204ENST00000483763 VWC2LB2RUY7 222 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms