RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 C19orf35Q6ZS72 473 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 CYP2G1PQ6ZSU1 146 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 TTC9CQ8N5M4 171 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 ABHD5Q8WTS1 349 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 ARPC1AQ92747 370 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 SLC35B3Q9H1N7 401 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 TACC2O95359 2948 aa11.11□□□□□ -0.63
CLK3-204ENST00000483723 RNF223E7ERA6 249 aa11.1□□□□□ -0.63
CLK3-204ENST00000483723 NDUFS6O75380 124 aaKnown RBP11.1□□□□□ -0.63
CLK3-204ENST00000483723 STAG3L2P0CL84 134 aa11.1□□□□□ -0.63
CLK3-204ENST00000483723 STAG3L3P0CL85 134 aa11.1□□□□□ -0.63
CLK3-204ENST00000483723 KLK9Q2XQG4 91 aa11.1□□□□□ -0.63
CLK3-204ENST00000483723 Q5PR19 223 aa11.1□□□□□ -0.63
CLK3-204ENST00000483723 MISP3Q96FF7 219 aa11.1□□□□□ -0.63
CLK3-204ENST00000483723 ACY3Q96HD9 319 aa11.1□□□□□ -0.63
CLK3-204ENST00000483723 C19orf24Q9BVV8 132 aa11.1□□□□□ -0.63
CLK3-204ENST00000483723 KLK9Q9UKQ9 250 aa11.1□□□□□ -0.63
CLK3-204ENST00000483723 USP9YO00507 2555 aaPredicted RBP11.1□□□□□ -0.63
CLK3-204ENST00000483723 CR1P17927 2039 aa11.1□□□□□ -0.63
CLK3-204ENST00000483723 A0A1W2PPV4 95 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 TCRBV4S1A1TA0A5B7 111 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 PSMB11A5LHX3 300 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 EIF3GO75821 320 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLK3-204ENST00000483723 MT-CO2P00403 227 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 BCL2P10415 239 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 DEFA4P12838 97 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 PPT1P50897 306 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 BPIFB3P59826 476 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 SLC35E3Q7Z769 313 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 RBM14Q96PK6 669 aaKnown RBP11.09□□□□□ -0.63
CLK3-204ENST00000483723 TRGV9Q99603 122 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 RASL11BQ9BPW5 248 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 FAM103A1Q9BTL3 118 aaKnown RBP11.09□□□□□ -0.63
CLK3-204ENST00000483723 GNG13Q9P2W3 67 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 HMGB3O15347 200 aaKnown RBP11.09□□□□□ -0.63
CLK3-204ENST00000483723 SCO1O75880 301 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 IGHV4-31P0DP07 118 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 TAGLN2P37802 199 aaKnown RBP11.09□□□□□ -0.63
CLK3-204ENST00000483723 RND2P52198 227 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 SELENOTP62341 195 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 RHOBP62745 196 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 GUCA2BQ16661 112 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 ATRAIDQ6UW56 229 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 RBMS3Q6XE24 437 aaKnown RBP11.09□□□□□ -0.63
CLK3-204ENST00000483723 SVBPQ8N300 66 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 RXFP4Q8TDU9 374 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 TMPRSS5Q9H3S3 457 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 VAX2Q9UIW0 290 aa11.09□□□□□ -0.63
CLK3-204ENST00000483723 K7EIM0 57 aa11.08□□□□□ -0.64
CLK3-204ENST00000483723 TGFAP01135 160 aa11.08□□□□□ -0.64
CLK3-204ENST00000483723 IFNA1P01562 189 aa11.08□□□□□ -0.64
CLK3-204ENST00000483723 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
CLK3-204ENST00000483723 GATA2P23769 480 aaPredicted RBP11.08□□□□□ -0.64
CLK3-204ENST00000483723 PSMB3P49720 205 aa11.08□□□□□ -0.64
CLK3-204ENST00000483723 DEFA5Q01523 94 aa11.08□□□□□ -0.64
CLK3-204ENST00000483723 HIST2H2BCQ6DN03 193 aa11.08□□□□□ -0.64
CLK3-204ENST00000483723 C5orf56Q8N8D9 126 aa11.08□□□□□ -0.64
CLK3-204ENST00000483723 SEPSECSQ9HD40 501 aaKnown RBP11.08□□□□□ -0.64
CLK3-204ENST00000483723 IGLV11-55A0A075B6I3 123 aa11.07□□□□□ -0.64
CLK3-204ENST00000483723 FBP1P09467 338 aa11.07□□□□□ -0.64
CLK3-204ENST00000483723 OR5G3P0C626 314 aa11.07□□□□□ -0.64
CLK3-204ENST00000483723 OR4X1Q8NH49 305 aa11.07□□□□□ -0.64
CLK3-204ENST00000483723 SGMS2Q8NHU3 365 aa11.07□□□□□ -0.64
CLK3-204ENST00000483723 SSX3Q99909 188 aa11.07□□□□□ -0.64
CLK3-204ENST00000483723 HSPB9Q9BQS6 159 aa11.07□□□□□ -0.64
CLK3-204ENST00000483723 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
CLK3-204ENST00000483723 SOX21Q9Y651 276 aaPredicted RBP11.07□□□□□ -0.64
CLK3-204ENST00000483723 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.07□□□□□ -0.646e-7■■■□□ 16.8
CLK3-204ENST00000483723 CRYBG3Q68DQ2 2970 aa11.07□□□□□ -0.64
CLK3-204ENST00000483723 ZFP92A6NM28 416 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 CYSRT1A8MQ03 144 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 CXorf1O96002 111 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 FSHBP01225 129 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 ZNF90Q03938 601 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 MAPK1IP1LQ8NDC0 245 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 GATAD1Q8WUU5 269 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 TMEM37Q8WXS4 190 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 C22orf15Q8WYQ4 148 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 Q96MF0 132 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 TNFRSF19Q9NS68 423 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 FUT9Q9Y231 359 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 MOB4Q9Y3A3 225 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 A6NDX4 124 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 AMY1AP04745 511 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 SPATA31B1PQ5VZV4 182 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 TMEM68Q96MH6 324 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 RNF2Q99496 336 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 DNAJC4Q9NNZ3 241 aa11.06□□□□□ -0.64
CLK3-204ENST00000483723 MAST4O15021 2626 aa11.05□□□□□ -0.64
CLK3-204ENST00000483723 ANKRD17O75179 2603 aaKnown RBP11.05□□□□□ -0.64
CLK3-204ENST00000483723 SNAPINO95295 136 aa11.05□□□□□ -0.64
CLK3-204ENST00000483723 PLP1P60201 277 aa11.05□□□□□ -0.64
CLK3-204ENST00000483723 SOHLH1Q5JUK2 328 aa11.05□□□□□ -0.64
CLK3-204ENST00000483723 FAM78BQ5VT40 261 aa11.05□□□□□ -0.64
CLK3-204ENST00000483723 PATE2Q6UY27 113 aa11.05□□□□□ -0.64
CLK3-204ENST00000483723 FAM110DQ8TAY7 271 aaPredicted RBP11.05□□□□□ -0.64
CLK3-204ENST00000483723 ZNF48Q96MX3 618 aaPredicted RBP11.05□□□□□ -0.64
CLK3-204ENST00000483723 IGHV3-21A0A0B4J1V1 117 aa11.04□□□□□ -0.64
CLK3-204ENST00000483723 CLN5O75503 358 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms