RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TMEM170AQ8WVE7 144 aa13.59□□□□□ -0.23
HDAC6-225ENST00000483506 DAZ1Q9NQZ3 744 aaKnown RBP13.59□□□□□ -0.23
HDAC6-225ENST00000483506 C15orf62A8K5M9 175 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 ZNF785A8K8V0 405 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 A8MZ25 164 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 FAM90A26D6RGX4 464 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 K7EMT4 169 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 GNG7O60262 68 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 IGHV3-48P01763 117 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 CD69Q07108 199 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 DHRS2Q13268 280 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 RNASEH2CQ8TDP1 164 aaKnown RBP13.58□□□□□ -0.24
HDAC6-225ENST00000483506 OR10C1Q96KK4 312 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 HIPK2Q9H2X6 1198 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 MLXQ9UH92 298 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 U3KQ87 197 aa13.58□□□□□ -0.24
HDAC6-225ENST00000483506 NXPH3O95157 252 aa13.57□□□□□ -0.24
HDAC6-225ENST00000483506 OR4E1P0C645 316 aa13.57□□□□□ -0.24
HDAC6-225ENST00000483506 OPRK1P41145 380 aa13.57□□□□□ -0.24
HDAC6-225ENST00000483506 ATP5IP56385 69 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-225ENST00000483506 LYG2Q86SG7 212 aa13.57□□□□□ -0.24
HDAC6-225ENST00000483506 NOXA1Q86UR1 476 aa13.57□□□□□ -0.24
HDAC6-225ENST00000483506 OR4X1Q8NH49 305 aa13.57□□□□□ -0.24
HDAC6-225ENST00000483506 OR1S1Q8NH92 325 aa13.57□□□□□ -0.24
HDAC6-225ENST00000483506 DTD1Q8TEA8 209 aa13.57□□□□□ -0.24
HDAC6-225ENST00000483506 RBKSQ9H477 322 aa13.57□□□□□ -0.24
HDAC6-225ENST00000483506 RPS10-NUDT3A0A1W2PQS6 291 aa13.56□□□□□ -0.24
HDAC6-225ENST00000483506 CLN5O75503 358 aa13.56□□□□□ -0.24
HDAC6-225ENST00000483506 TMEM50AO95807 157 aa13.56□□□□□ -0.24
HDAC6-225ENST00000483506 ANXA7P20073 488 aaKnown RBP13.56□□□□□ -0.24
HDAC6-225ENST00000483506 NPY1RP25929 384 aa13.56□□□□□ -0.24
HDAC6-225ENST00000483506 C11orf87Q6NUJ2 197 aa13.56□□□□□ -0.24
HDAC6-225ENST00000483506 WDR12Q9GZL7 423 aaKnown RBP13.56□□□□□ -0.24
HDAC6-225ENST00000483506 C20orf85Q9H1P6 137 aa13.56□□□□□ -0.24
HDAC6-225ENST00000483506 MRPL36Q9P0J6 103 aaKnown RBP13.56□□□□□ -0.24
HDAC6-225ENST00000483506 TRAV25A0A0B4J276 109 aa13.55□□□□□ -0.24
HDAC6-225ENST00000483506 NHLRC4P0CG21 123 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-225ENST00000483506 SLC25A4P12235 298 aa13.55□□□□□ -0.24
HDAC6-225ENST00000483506 GGNBP1Q5YKI7 109 aa13.55□□□□□ -0.24
HDAC6-225ENST00000483506 BTNL8Q6UX41 500 aa13.55□□□□□ -0.24
HDAC6-225ENST00000483506 GTSCR1Q86UQ5 136 aa13.55□□□□□ -0.24
HDAC6-225ENST00000483506 TMEM61Q8N0U2 210 aa13.55□□□□□ -0.24
HDAC6-225ENST00000483506 TMEM116Q8NCL8 245 aa13.55□□□□□ -0.24
HDAC6-225ENST00000483506 COQ8AQ8NI60 647 aa13.55□□□□□ -0.24
HDAC6-225ENST00000483506 TCRBP04435 133 aa13.54□□□□□ -0.24
HDAC6-225ENST00000483506 HOXB5P09067 269 aa13.54□□□□□ -0.24
HDAC6-225ENST00000483506 IGHV4-30-4P0DP06 118 aa13.54□□□□□ -0.24
HDAC6-225ENST00000483506 ASAH1Q13510 395 aa13.54□□□□□ -0.24
HDAC6-225ENST00000483506 MLANAQ16655 118 aa13.54□□□□□ -0.24
HDAC6-225ENST00000483506 ZNF600Q6ZNG1 722 aa13.54□□□□□ -0.24
HDAC6-225ENST00000483506 WDR89Q96FK6 387 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-225ENST00000483506 C20orf24Q9BUV8 137 aa13.54□□□□□ -0.24
HDAC6-225ENST00000483506 C19orf73Q9NVV2 129 aa13.54□□□□□ -0.24
HDAC6-225ENST00000483506 TBC1D24Q9ULP9 559 aa13.54□□□□□ -0.24
HDAC6-225ENST00000483506 MED6O75586 246 aa13.53□□□□□ -0.24
HDAC6-225ENST00000483506 FRMD6-AS1P0C7T7 363 aa13.53□□□□□ -0.24
HDAC6-225ENST00000483506 ZNF846Q147U1 533 aa13.53□□□□□ -0.24
HDAC6-225ENST00000483506 C4orf46Q504U0 113 aa13.53□□□□□ -0.24
HDAC6-225ENST00000483506 ETFRF1Q6IPR1 90 aa13.53□□□□□ -0.24
HDAC6-225ENST00000483506 PRSS54Q6PEW0 395 aa13.53□□□□□ -0.24
HDAC6-225ENST00000483506 MITD1Q8WV92 249 aa13.53□□□□□ -0.24
HDAC6-225ENST00000483506 ZFAND3Q9H8U3 227 aa13.53□□□□□ -0.24
HDAC6-225ENST00000483506 IGHV3OR16-8A0A075B7F1 116 aa13.52□□□□□ -0.25
HDAC6-225ENST00000483506 TRAV30A0A087WSZ9 112 aa13.52□□□□□ -0.25
HDAC6-225ENST00000483506 SCGB2A1O75556 95 aa13.52□□□□□ -0.25
HDAC6-225ENST00000483506 ADAP1O75689 374 aa13.52□□□□□ -0.25
HDAC6-225ENST00000483506 IFNA10P01566 189 aa13.52□□□□□ -0.25
HDAC6-225ENST00000483506 IGKV1-17P01599 117 aa13.52□□□□□ -0.25
HDAC6-225ENST00000483506 TOMM20LQ6UXN7 152 aa13.52□□□□□ -0.25
HDAC6-225ENST00000483506 SMPXQ9UHP9 88 aa13.52□□□□□ -0.25
HDAC6-225ENST00000483506 IGHV7-4-1A0A0J9YVY3 117 aa13.51□□□□□ -0.25
HDAC6-225ENST00000483506 UPK1BO75841 260 aa13.51□□□□□ -0.25
HDAC6-225ENST00000483506 CD81P60033 236 aa13.51□□□□□ -0.25
HDAC6-225ENST00000483506 GUCA2BQ16661 112 aa13.51□□□□□ -0.25
HDAC6-225ENST00000483506 CIB3Q96Q77 187 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-225ENST00000483506 NEURL2Q9BR09 285 aa13.51□□□□□ -0.25
HDAC6-225ENST00000483506 GINS3Q9BRX5 216 aa13.51□□□□□ -0.25
HDAC6-225ENST00000483506 NUDT15Q9NV35 164 aa13.51□□□□□ -0.25
HDAC6-225ENST00000483506 PUS1Q9Y606 427 aaKnown RBP eCLIP13.51□□□□□ -0.25
HDAC6-225ENST00000483506 HUWE1Q7Z6Z7 4374 aaKnown RBP13.51□□□□□ -0.25
HDAC6-225ENST00000483506 STAB2Q8WWQ8 2551 aa13.51□□□□□ -0.25
HDAC6-225ENST00000483506 TRAV14DV4A0A0A6YYC5 116 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 CHEK1O14757 476 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 TSPAN4O14817 238 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 ZNF207O43670 478 aaKnown RBP13.5□□□□□ -0.25
HDAC6-225ENST00000483506 SYNGR2O43760 224 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 YIF1AO95070 293 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 SCAF4O95104 1147 aaKnown RBP13.5□□□□□ -0.25
HDAC6-225ENST00000483506 IFNA21P01568 189 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 CD7P09564 240 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 IGLC1P0CG04 106 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 RND2P52198 227 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 ID3Q02535 119 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 RBPMS2Q6ZRY4 209 aaKnown RBP13.5□□□□□ -0.25
HDAC6-225ENST00000483506 SLC16A13Q7RTY0 426 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 OR52B4Q8NGK2 314 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 OR4D5Q8NGN0 318 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 OR1S2Q8NGQ3 325 aa13.5□□□□□ -0.25
HDAC6-225ENST00000483506 SPAG8Q99932 426 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-225ENST00000483506 MPTX1A8MV57 137 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms