RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PPYP01298 95 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 APOA1P02647 267 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 FGF2P09038 288 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 RBMY1A1P0DJD3 496 aaKnown RBP5.37□□□□□ -1.55
CSDE1-206ENST00000483030 RBMY1CP0DJD4 496 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 HLA-DMBP28068 263 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 DEFB131AP59861 70 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 ERVK-16P61578 105 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 RPL11P62913 178 aaKnown RBP5.37□□□□□ -1.55
CSDE1-206ENST00000483030 PAFAH1B2P68402 229 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 RBMY1FQ15415 496 aaKnown RBP5.37□□□□□ -1.55
CSDE1-206ENST00000483030 AADACL3Q5VUY0 350 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 FAM90A2PQ658T7 463 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 LEMD1Q68G75 181 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 C22orf42Q6IC83 251 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 ZNF818PQ6ZRF7 136 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 TCF24Q7RTU0 167 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 BEST4Q8NFU0 473 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 DTD1Q8TEA8 209 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 LSM10Q969L4 123 aaKnown RBP5.37□□□□□ -1.55
CSDE1-206ENST00000483030 DGCR14Q96DF8 476 aaKnown RBP5.37□□□□□ -1.55
CSDE1-206ENST00000483030 C16orf92Q96LL3 132 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 NSG2Q9Y328 171 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 OR51B2Q9Y5P1 312 aa5.37□□□□□ -1.55
CSDE1-206ENST00000483030 PUS1Q9Y606 427 aaKnown RBP eCLIP5.37□□□□□ -1.55
CSDE1-206ENST00000483030 IGHV4-4A0A075B6R2 117 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 TRAV18A0A075B6X5 111 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 IGHV4-28A0A0C4DH34 117 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 A4D1N5 150 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 PRSS29PA6NIE9 313 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 C15orf61A6NNL5 157 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 M0R2N4 97 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 DNASE2O00115 360 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-206ENST00000483030 SNAPC5O75971 98 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 SCGNO76038 276 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 KRASP01116 189 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 IGHV3-48P01763 117 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 GIG44P09565 113 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-206ENST00000483030 FHITP49789 147 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 NKX2-5P52952 324 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-206ENST00000483030 MFAP4P55083 255 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 AQP4P55087 323 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 Q6ZTC4 211 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 ZNF367Q7RTV3 350 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 TMEM17Q86X19 198 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 HOGA1Q86XE5 327 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 Q8NAQ8 132 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 FCAMRQ8WWV6 532 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 SLC25A46Q96AG3 418 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 OR10C1Q96KK4 312 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 HRH4Q9H3N8 390 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 NDUFB11Q9NX14 153 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 COMMD9Q9P000 198 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 DAPK2Q9UIK4 370 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 RYR1P21817 5038 aa5.36□□□□□ -1.55
CSDE1-206ENST00000483030 TRAV10A0A0B4J240 114 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 IGHV3-66A0A0C4DH42 116 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 MARCH11A6NNE9 402 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 I3L2K1 104 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 RTL8CO15255 209 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 ST8SIA3O43173 380 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 PGLYRP1O75594 196 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-206ENST00000483030 DFFBO76075 338 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 APOHP02749 345 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-206ENST00000483030 F2RP25116 425 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 GNRHRP30968 328 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 G6PCP35575 357 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 LPAR6P43657 344 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 TBCEQ15813 527 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-206ENST00000483030 LBHQ53QV2 105 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-206ENST00000483030 CT83Q5H943 113 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 STHQ8IWL8 128 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 CENPSQ8N2Z9 138 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 FAM24BQ8N5W8 94 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 POM121L12Q8N7R1 296 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 DUSP18Q8NEJ0 188 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 OR1P1Q8NH06 330 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 LGALS14Q8TCE9 139 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 ST8SIA2Q92186 375 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 MISP3Q96FF7 219 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 TMEM56Q96MV1 263 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 SEC22CQ9BRL7 303 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 NXF2Q9GZY0 626 aaKnown RBP5.35□□□□□ -1.55
CSDE1-206ENST00000483030 MS4A6AQ9H2W1 248 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 PRNDQ9UKY0 176 aa5.35□□□□□ -1.55
CSDE1-206ENST00000483030 GNG7O60262 68 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 MT-CO2P00403 227 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 RLN1P04808 185 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 CD5P06127 495 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 EIF4EP06730 217 aaKnown RBP5.34□□□□□ -1.55
CSDE1-206ENST00000483030 MIFP14174 115 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 HERV-K104P61576 105 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 PVRIGQ6DKI7 326 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 TOMM20LQ6UXN7 152 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 ZNF767PQ75MW2 155 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 TSPAN14Q8NG11 270 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 OR5AP2Q8NGF4 316 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 OR4D10Q8NGI6 311 aa5.34□□□□□ -1.55
CSDE1-206ENST00000483030 OR5H6Q8NGV6 325 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms