RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 HSPB11Q9Y547 144 aa15.46■□□□□ 0.07
TRAPPC12-220ENST00000482645 S4R3C0 116 aa15.46■□□□□ 0.07
TRAPPC12-220ENST00000482645 DNHD1Q96M86 4753 aa15.46■□□□□ 0.06
TRAPPC12-220ENST00000482645 IGHV3-21A0A0B4J1V1 117 aa15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 A0A0G2JLM5 398 aa15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 FAM223BA6NKX1 122 aa15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 NDUFB8O95169 186 aa15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 HIST1H1BP16401 226 aaKnown RBP15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 CXCL2P19875 107 aa15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 CDX1P47902 265 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 ATP5G2Q06055 141 aa15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 BAXQ07812 192 aa15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 DEFB136Q30KP8 78 aa15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 FAM223AQ8IWN6 122 aa15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 BSCL2Q96G97 398 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 SMIM3Q9BZL3 60 aa15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 THYN1Q9P016 225 aa15.45■□□□□ 0.06
TRAPPC12-220ENST00000482645 TRRAPQ9Y4A5 3859 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 BRI3O95415 125 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 IGHV3-23P01764 117 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 OPRK1P41145 380 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 ATP5IP56385 69 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 SLC38A11Q08AI6 406 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 ARL16Q0P5N6 197 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 ZNF345Q14585 488 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 LILRB2Q8N423 598 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 C9orf62Q8N4C0 152 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 OR1L6Q8NGR2 347 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 C4orf3Q8WVX3 66 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 PPP1R14BQ96C90 147 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 USMG5Q96IX5 58 aa15.44■□□□□ 0.06
TRAPPC12-220ENST00000482645 PMS2P5A8MQ11 134 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 HBG1P69891 147 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 HBG2P69892 147 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 OR2F1Q13607 317 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 EXOSC2Q13868 293 aaKnown RBP15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 OR10P1Q8NGE3 313 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 OR5C1Q8NGR4 320 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 DUX3Q96PT4 197 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 FBXL17Q9UF56 701 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 ANKRD34BA5PLL1 514 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 M0QZ24 198 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 CORTO00230 105 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 SCAF4O95104 1147 aaKnown RBP15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 CLINT1Q14677 625 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 OR1S2Q8NGQ3 325 aa15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 RNASEH2CQ8TDP1 164 aaKnown RBP15.43■□□□□ 0.06
TRAPPC12-220ENST00000482645 MFSD2BA6NFX1 497 aa15.42■□□□□ 0.06
TRAPPC12-220ENST00000482645 PRSS46E5RG02 174 aa15.42■□□□□ 0.06
TRAPPC12-220ENST00000482645 LGALSLQ3ZCW2 172 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC12-220ENST00000482645 KCNRGQ8N5I3 272 aa15.42■□□□□ 0.06
TRAPPC12-220ENST00000482645 ARL6Q9H0F7 186 aa15.42■□□□□ 0.06
TRAPPC12-220ENST00000482645 TSPAN15O95858 294 aa15.41■□□□□ 0.06
TRAPPC12-220ENST00000482645 IGHV3-48P01763 117 aa15.41■□□□□ 0.06
TRAPPC12-220ENST00000482645 LGALS1P09382 135 aaKnown RBP15.41■□□□□ 0.06
TRAPPC12-220ENST00000482645 PVRIGQ6DKI7 326 aa15.41■□□□□ 0.06
TRAPPC12-220ENST00000482645 SLC16A13Q7RTY0 426 aa15.41■□□□□ 0.06
TRAPPC12-220ENST00000482645 EEF1AKMT3Q96AZ1 226 aa15.41■□□□□ 0.06
TRAPPC12-220ENST00000482645 A0A0D9SG52 128 aa15.4■□□□□ 0.06
TRAPPC12-220ENST00000482645 SMCO3A2RU48 225 aa15.4■□□□□ 0.06
TRAPPC12-220ENST00000482645 I3L521 148 aa15.4■□□□□ 0.06
TRAPPC12-220ENST00000482645 MT-CO2P00403 227 aa15.4■□□□□ 0.06
TRAPPC12-220ENST00000482645 S100A11P31949 105 aa15.4■□□□□ 0.06
TRAPPC12-220ENST00000482645 CD69Q07108 199 aa15.4■□□□□ 0.06
TRAPPC12-220ENST00000482645 LAMTOR1Q6IAA8 161 aa15.4■□□□□ 0.06
TRAPPC12-220ENST00000482645 TMUB2Q71RG4 321 aa15.4■□□□□ 0.06
TRAPPC12-220ENST00000482645 OR4F17Q8NGA8 305 aa15.4■□□□□ 0.06
TRAPPC12-220ENST00000482645 OR4F4Q96R69 305 aa15.4■□□□□ 0.06
TRAPPC12-220ENST00000482645 FNDC4Q9H6D8 234 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC12-220ENST00000482645 UBE2L5PA0A1B0GUS4 154 aa15.39■□□□□ 0.05
TRAPPC12-220ENST00000482645 PF4P02776 101 aa15.39■□□□□ 0.05
TRAPPC12-220ENST00000482645 KLK9Q2XQG4 91 aa15.39■□□□□ 0.05
TRAPPC12-220ENST00000482645 UBAC2Q8NBM4 344 aa15.39■□□□□ 0.05
TRAPPC12-220ENST00000482645 OR11H1Q8NG94 326 aa15.39■□□□□ 0.05
TRAPPC12-220ENST00000482645 RAX2Q96IS3 184 aa15.39■□□□□ 0.05
TRAPPC12-220ENST00000482645 CXorf58Q96LI9 332 aa15.39■□□□□ 0.05
TRAPPC12-220ENST00000482645 KLK9Q9UKQ9 250 aa15.39■□□□□ 0.05
TRAPPC12-220ENST00000482645 WNK1Q9H4A3 2382 aa15.39■□□□□ 0.05
TRAPPC12-220ENST00000482645 RPS10-NUDT3A0A1W2PQS6 291 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 KANTRA0A1W2PQU2 76 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 K7EIM0 57 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 BCL2L11O43521 198 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 TRBV12-3P01733 135 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 DLK1P80370 383 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 MLANAQ16655 118 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 ZNF343Q6P1L6 599 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 CLEC19AQ6UXS0 136 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 SCARB1Q8WTV0 552 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 SLC35E1Q96K37 410 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 ATP5SQ99766 215 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 ARPC5LQ9BPX5 153 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 IGHV4OR15-8A0A075B7B6 117 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 A0A087WW49 117 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 I3L2K1 104 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 CCL24O00175 119 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 AKR1C1Q04828 323 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 ETFRF1Q6IPR1 90 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 OR1N2Q8NGR9 330 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 DPF1Q92782 380 aa15.38■□□□□ 0.05
TRAPPC12-220ENST00000482645 ACY3Q96HD9 319 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms