RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 LGI3Q8N145 548 aa6.73□□□□□ -1.33
LINC00544-202ENST00000481738 SPAG8Q99932 426 aaPredicted RBP6.73□□□□□ -1.33
LINC00544-202ENST00000481738 RHPN1-AS1Q9BWJ2 59 aa6.73□□□□□ -1.33
LINC00544-202ENST00000481738 SRRQ9GZT4 340 aa6.73□□□□□ -1.33
LINC00544-202ENST00000481738 FNDC4Q9H6D8 234 aaPredicted RBP6.73□□□□□ -1.33
LINC00544-202ENST00000481738 RETNQ9HD89 108 aa6.73□□□□□ -1.33
LINC00544-202ENST00000481738 MRPL36Q9P0J6 103 aaKnown RBP6.73□□□□□ -1.33
LINC00544-202ENST00000481738 UBQLN2Q9UHD9 624 aa6.73□□□□□ -1.33
LINC00544-202ENST00000481738 SMPXQ9UHP9 88 aa6.73□□□□□ -1.33
LINC00544-202ENST00000481738 DNAH9Q9NYC9 4486 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 IGHV3OR16-13A0A075B7E8 117 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 IGHV3-74A0A0B4J1X5 117 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 A0A0B4J2A0 478 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 CHEK1O14757 476 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 TSPAN4O14817 238 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 CLN5O75503 358 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 HTR2BP41595 481 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 CCR6P51684 374 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 SRPXP78539 464 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 TOMM20LQ6UXN7 152 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 ZNF600Q6ZNG1 722 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 LYZL2Q7Z4W2 148 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 TMEM116Q8NCL8 245 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 SLC24A4Q8NFF2 622 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 MUC7Q8TAX7 377 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 DEDD2Q8WXF8 326 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 OR10C1Q96KK4 312 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 CITED4Q96RK1 184 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 RNF2Q99496 336 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 GINS3Q9BRX5 216 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 HIPK2Q9H2X6 1198 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 SHPKQ9UHJ6 478 aa6.72□□□□□ -1.33
LINC00544-202ENST00000481738 PUS1Q9Y606 427 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC00544-202ENST00000481738 IGKV3-7A0A075B6H7 116 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 TRAV14DV4A0A0A6YYC5 116 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 RPS10-NUDT3A0A1W2PQS6 291 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 OR4C46A6NHA9 309 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 C3orf84H3BNL1 204 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 VAMP1P23763 118 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 NPY1RP25929 384 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 INPP1P49441 399 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 SMCO1Q147U7 214 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 BAK1Q16611 211 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 C2orf83Q53S99 150 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 TMEM128Q5BJH2 165 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 NMSQ5H8A3 153 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 TRIQKQ629K1 86 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 OR4X1Q8NH49 305 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 OR1S1Q8NH92 325 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 FAM110AQ9BQ89 295 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 SLC25A21Q9BQT8 299 aaPredicted RBP6.71□□□□□ -1.34
LINC00544-202ENST00000481738 ZFAND3Q9H8U3 227 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 CACFD1Q9UGQ2 172 aa6.71□□□□□ -1.34
LINC00544-202ENST00000481738 LOC102724200A0A096LPH7 203 aaPredicted RBP6.7□□□□□ -1.34
LINC00544-202ENST00000481738 A0A1B0GU03 582 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 LINC00854A0A1B0GVQ3 168 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 SCGB2A1O75556 95 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 SFT2D2O95562 160 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 IFNA10P01566 189 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 APOHP02749 345 aaPredicted RBP6.7□□□□□ -1.34
LINC00544-202ENST00000481738 TFPI2P48307 235 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 RND2P52198 227 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 TNFRSF9Q07011 255 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 PPP1R1AQ13522 171 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 RBMS2Q15434 407 aaKnown RBP6.7□□□□□ -1.34
LINC00544-202ENST00000481738 ODF3L2Q3SX64 289 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 TIGITQ495A1 244 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 TCF24Q7RTU0 167 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 CENPSQ8N2Z9 138 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 RNASEH2CQ8TDP1 164 aaKnown RBP6.7□□□□□ -1.34
LINC00544-202ENST00000481738 TMEM170AQ8WVE7 144 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 ST8SIA2Q92186 375 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 SDHCQ99643 169 aaPredicted RBP6.7□□□□□ -1.34
LINC00544-202ENST00000481738 GGTLC1Q9BX51 225 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 RBKSQ9H477 322 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 EDA2RQ9HAV5 297 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 HSPB7Q9UBY9 170 aa6.7□□□□□ -1.34
LINC00544-202ENST00000481738 TRAV30A0A087WSZ9 112 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 PIGBOS1A0A0B4J2F0 54 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 IGHV3-66A0A0C4DH42 116 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 DUXBA0A1W2PPF3 345 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 NAP1L6A6NFF2 107 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 IGKV1-17P01599 117 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 SLC25A4P12235 298 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 BMI1P35226 326 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 FAM90A2PQ658T7 463 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 ETFRF1Q6IPR1 90 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 PRSS54Q6PEW0 395 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 NOXA1Q86UR1 476 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 LILRB2Q8N423 598 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 GBGT1Q8N5D6 347 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 LRTM2Q8N967 370 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 OR1S2Q8NGQ3 325 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 DTD1Q8TEA8 209 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 VSIRQ9H7M9 311 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 NDUFA13Q9P0J0 144 aa6.69□□□□□ -1.34
LINC00544-202ENST00000481738 PITX3O75364 302 aa6.68□□□□□ -1.34
LINC00544-202ENST00000481738 DFFBO76075 338 aa6.68□□□□□ -1.34
LINC00544-202ENST00000481738 NDUFB6O95139 128 aa6.68□□□□□ -1.34
LINC00544-202ENST00000481738 HOXB5P09067 269 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms