RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 CCDC88AQ3V6T2 1871 aa2.84□□□□□ -1.96
COPA-203ENST00000481040 ZCCHC6Q5VYS8 1495 aaKnown RBP2.84□□□□□ -1.96
COPA-203ENST00000481040 TOPBP1Q92547 1522 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 IGKV2-24A0A0C4DH68 120 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 DUXBA0A1W2PPF3 345 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 A0A1W2PRE2 83 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 ZNF860A6NHJ4 632 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 ODF3BA8MYP8 253 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 PPBPP02775 128 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 EIF2B2P49770 351 aaKnown RBP2.83□□□□□ -1.96
COPA-203ENST00000481040 EMP1P54849 157 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 RRN3P1Q2M238 152 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 AGTRAPQ6RW13 159 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 RPP25LQ8N5L8 163 aaKnown RBP2.83□□□□□ -1.96
COPA-203ENST00000481040 Q8NDZ9 215 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 OR5J2Q8NH18 312 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 MYO16Q9Y6X6 1858 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 UHRF1BP1Q6BDS2 1440 aa2.83□□□□□ -1.96
COPA-203ENST00000481040 ZSWIM8A7E2V4 1837 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 SHROOM3Q8TF72 1996 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 FUOMA2VDF0 154 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 PRORSD1PA6NEY8 169 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 H7C2G1 150 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 CST8O60676 142 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 IGLV3-19P01714 112 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 IGKV1-16P04430 117 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 DEFA4P12838 97 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 SUPT4H1P63272 117 aaKnown RBP2.82□□□□□ -1.96
COPA-203ENST00000481040 LTC4SQ16873 150 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 PABPC1L2AQ5JQF8 200 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 HIST3H2BBQ8N257 126 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 RMND5BQ96G75 393 aaPredicted RBP2.82□□□□□ -1.96
COPA-203ENST00000481040 DNAJC30Q96LL9 226 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 TMEM133Q9H2Q1 129 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 PSORS1C2Q9UIG4 136 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 PCTPQ9UKL6 214 aa2.82□□□□□ -1.96
COPA-203ENST00000481040 MYH7BA7E2Y1 1941 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 MALRD1Q5VYJ5 2156 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 C19orf84I3L1E1 186 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 PIAS1O75925 651 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 IFNA14P01570 189 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 RNASE2P10153 161 aaKnown RBP2.81□□□□□ -1.96
COPA-203ENST00000481040 NFYAP23511 347 aaPredicted RBP2.81□□□□□ -1.96
COPA-203ENST00000481040 SARNPP82979 210 aaKnown RBP2.81□□□□□ -1.96
COPA-203ENST00000481040 TMEM128Q5BJH2 165 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 C12orf29Q8N999 325 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 OR8D4Q8NGM9 314 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 PFN4Q8NHR9 129 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 SLAMF6Q96DU3 332 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 TVP23CQ96ET8 276 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 GINS4Q9BRT9 223 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 OR2J1Q9GZK6 312 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 OSTCQ9NRP0 149 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 MED11Q9P086 117 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 GINS2Q9Y248 185 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 SETD5Q9C0A6 1442 aa2.81□□□□□ -1.96
COPA-203ENST00000481040 DENND4CQ5VZ89 1909 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 A0A087X0T9 212 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 IGKV1-9A0A0C4DH69 117 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 A0A0D9SEW6 157 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 E7EQ34 232 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 TAX1BP3O14907 124 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 RAB4BP61018 213 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 SAMD13Q5VXD3 122 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 TOMM20LQ6UXN7 152 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 C10orf126Q8N4M7 172 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 SIGLECL1Q8N7X8 197 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 NUP35Q8NFH5 326 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 WFDC5Q8TCV5 224 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 SKA2Q8WVK7 121 aaPredicted RBP2.8□□□□□ -1.96
COPA-203ENST00000481040 ADAT3Q96EY9 351 aaPredicted RBP2.8□□□□□ -1.96
COPA-203ENST00000481040 EFCAB11Q9BUY7 163 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 CKLFQ9UBR5 152 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 HSPB11Q9Y547 144 aa2.8□□□□□ -1.96
COPA-203ENST00000481040 ZCCHC11Q5TAX3 1644 aaKnown RBP2.79□□□□□ -1.96
COPA-203ENST00000481040 CEP164Q9UPV0 1460 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 AZU1P20160 251 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 EIF5AP63241 154 aaKnown RBP2.79□□□□□ -1.96
COPA-203ENST00000481040 ZNF90Q03938 601 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 SURF2Q15527 256 aaPredicted RBP2.79□□□□□ -1.96
COPA-203ENST00000481040 FAM27BQ5VT28 67 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 LINC00304Q8N9R0 145 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 STAG3L4Q8TBR4 150 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 DCANP1Q8TF63 244 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 C11orf40Q8WZ69 217 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 MRPS24Q96EL2 167 aaKnown RBP2.79□□□□□ -1.96
COPA-203ENST00000481040 CCDC32Q9BV29 185 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 LRTM1Q9HBL6 345 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 UBR2Q8IWV8 1755 aa2.79□□□□□ -1.96
COPA-203ENST00000481040 SMARCA2P51531 1590 aa2.78□□□□□ -1.96
COPA-203ENST00000481040 DOCK4Q8N1I0 1966 aa2.78□□□□□ -1.96
COPA-203ENST00000481040 COL1A2P08123 1366 aa2.78□□□□□ -1.96
COPA-203ENST00000481040 IGHV3-64A0A075B6Q5 118 aa2.78□□□□□ -1.96
COPA-203ENST00000481040 IGHV1-18A0A0C4DH31 117 aa2.78□□□□□ -1.96
COPA-203ENST00000481040 MUC21A0A0G2JKD1 596 aa2.78□□□□□ -1.96
COPA-203ENST00000481040 TRBV10-2A0A0K0K1G8 114 aa2.78□□□□□ -1.96
COPA-203ENST00000481040 MUC21A0A140T8X8 626 aa2.78□□□□□ -1.96
COPA-203ENST00000481040 TMEM212A6NML5 194 aa2.78□□□□□ -1.96
COPA-203ENST00000481040 OGNP20774 298 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms