RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SUPT4H1P63272 117 aaKnown RBP12.72□□□□□ -0.37
HSPG2-209ENST00000480900 SRPXP78539 464 aa12.72□□□□□ -0.37
HSPG2-209ENST00000480900 SPANXN2Q5MJ10 180 aa12.72□□□□□ -0.37
HSPG2-209ENST00000480900 MUC7Q8TAX7 377 aa12.72□□□□□ -0.37
HSPG2-209ENST00000480900 SHPKQ9UHJ6 478 aa12.72□□□□□ -0.37
HSPG2-209ENST00000480900 SMPXQ9UHP9 88 aa12.72□□□□□ -0.37
HSPG2-209ENST00000480900 IGHV7-4-1A0A0J9YVY3 117 aa12.71□□□□□ -0.37
HSPG2-209ENST00000480900 SULT1A3P0DMM9 295 aa12.71□□□□□ -0.37
HSPG2-209ENST00000480900 SULT1A4P0DMN0 295 aa12.71□□□□□ -0.37
HSPG2-209ENST00000480900 ANXA3P12429 323 aa12.71□□□□□ -0.37
HSPG2-209ENST00000480900 TMEM116Q8NCL8 245 aa12.71□□□□□ -0.37
HSPG2-209ENST00000480900 HIPK2Q9H2X6 1198 aa12.71□□□□□ -0.37
HSPG2-209ENST00000480900 FNDC4Q9H6D8 234 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-209ENST00000480900 HEYLQ9NQ87 328 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-209ENST00000480900 PRR13Q9NZ81 148 aa12.71□□□□□ -0.37
HSPG2-209ENST00000480900 PIGBOS1A0A0B4J2F0 54 aa12.7□□□□□ -0.38
HSPG2-209ENST00000480900 CEBPZOSA8MTT3 80 aa12.7□□□□□ -0.38
HSPG2-209ENST00000480900 TMEM50AO95807 157 aa12.7□□□□□ -0.38
HSPG2-209ENST00000480900 OPRK1P41145 380 aa12.7□□□□□ -0.38
HSPG2-209ENST00000480900 C2orf83Q53S99 150 aa12.7□□□□□ -0.38
HSPG2-209ENST00000480900 NMSQ5H8A3 153 aa12.7□□□□□ -0.38
HSPG2-209ENST00000480900 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
HSPG2-209ENST00000480900 LGI3Q8N145 548 aa12.7□□□□□ -0.38
HSPG2-209ENST00000480900 OR4X1Q8NH49 305 aa12.7□□□□□ -0.38
HSPG2-209ENST00000480900 GINS3Q9BRX5 216 aa12.7□□□□□ -0.38
HSPG2-209ENST00000480900 DNAH7Q8WXX0 4024 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 TRAV14DV4A0A0A6YYC5 116 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 CHEK1O14757 476 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 CLN5O75503 358 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 SCGB2A1O75556 95 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 CCR6P51684 374 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 TMEM128Q5BJH2 165 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 TOMM20LQ6UXN7 152 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 SLC24A4Q8NFF2 622 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 RNF2Q99496 336 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 SLC25A21Q9BQT8 299 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-209ENST00000480900 RHPN1-AS1Q9BWJ2 59 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 SRRQ9GZT4 340 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 EDA2RQ9HAV5 297 aa12.69□□□□□ -0.38
HSPG2-209ENST00000480900 RPS10-NUDT3A0A1W2PQS6 291 aa12.68□□□□□ -0.38
HSPG2-209ENST00000480900 OR4C46A6NHA9 309 aa12.68□□□□□ -0.38
HSPG2-209ENST00000480900 BMI1P35226 326 aa12.68□□□□□ -0.38
HSPG2-209ENST00000480900 SMCO1Q147U7 214 aa12.68□□□□□ -0.38
HSPG2-209ENST00000480900 LYZL2Q7Z4W2 148 aa12.68□□□□□ -0.38
HSPG2-209ENST00000480900 TMED4Q7Z7H5 227 aa12.68□□□□□ -0.38
HSPG2-209ENST00000480900 RNASEH2CQ8TDP1 164 aaKnown RBP12.68□□□□□ -0.38
HSPG2-209ENST00000480900 FAM110AQ9BQ89 295 aa12.68□□□□□ -0.38
HSPG2-209ENST00000480900 ZFAND3Q9H8U3 227 aa12.68□□□□□ -0.38
HSPG2-209ENST00000480900 MRPL36Q9P0J6 103 aaKnown RBP12.68□□□□□ -0.38
HSPG2-209ENST00000480900 PUS1Q9Y606 427 aaKnown RBP eCLIP12.68□□□□□ -0.38
HSPG2-209ENST00000480900 KMT2CQ8NEZ4 4911 aaKnown RBP12.67□□□□□ -0.38
HSPG2-209ENST00000480900 DUXBA0A1W2PPF3 345 aa12.67□□□□□ -0.38
HSPG2-209ENST00000480900 CD5P06127 495 aa12.67□□□□□ -0.38
HSPG2-209ENST00000480900 TNFRSF9Q07011 255 aa12.67□□□□□ -0.38
HSPG2-209ENST00000480900 NOXA1Q86UR1 476 aa12.67□□□□□ -0.38
HSPG2-209ENST00000480900 GGTLC1Q9BX51 225 aa12.67□□□□□ -0.38
HSPG2-209ENST00000480900 RETNQ9HD89 108 aa12.67□□□□□ -0.38
HSPG2-209ENST00000480900 HSPB7Q9UBY9 170 aa12.67□□□□□ -0.38
HSPG2-209ENST00000480900 TRAV30A0A087WSZ9 112 aa12.66□□□□□ -0.38
HSPG2-209ENST00000480900 LOC102724200A0A096LPH7 203 aaPredicted RBP12.66□□□□□ -0.38
HSPG2-209ENST00000480900 IGHV3-49A0A0A0MS15 119 aa12.66□□□□□ -0.38
HSPG2-209ENST00000480900 A0A1B0GU03 582 aa12.66□□□□□ -0.38
HSPG2-209ENST00000480900 NXPH3O95157 252 aa12.66□□□□□ -0.38
HSPG2-209ENST00000480900 SLC25A4P12235 298 aa12.66□□□□□ -0.38
HSPG2-209ENST00000480900 NPY1RP25929 384 aa12.66□□□□□ -0.38
HSPG2-209ENST00000480900 MLANAQ16655 118 aa12.66□□□□□ -0.38
HSPG2-209ENST00000480900 ODF3L2Q3SX64 289 aa12.66□□□□□ -0.38
HSPG2-209ENST00000480900 TMEM170AQ8WVE7 144 aa12.66□□□□□ -0.38
HSPG2-209ENST00000480900 VSIRQ9H7M9 311 aa12.66□□□□□ -0.38
HSPG2-209ENST00000480900 IGKV1-17P01599 117 aa12.65□□□□□ -0.38
HSPG2-209ENST00000480900 LYL1P12980 280 aa12.65□□□□□ -0.38
HSPG2-209ENST00000480900 RBMS2Q15434 407 aaKnown RBP12.65□□□□□ -0.38
HSPG2-209ENST00000480900 CASC10Q5T4H9 136 aa12.65□□□□□ -0.38
HSPG2-209ENST00000480900 FAM90A2PQ658T7 463 aa12.65□□□□□ -0.38
HSPG2-209ENST00000480900 ETFRF1Q6IPR1 90 aa12.65□□□□□ -0.38
HSPG2-209ENST00000480900 PRSS54Q6PEW0 395 aa12.65□□□□□ -0.38
HSPG2-209ENST00000480900 LRTM2Q8N967 370 aa12.65□□□□□ -0.38
HSPG2-209ENST00000480900 UBQLN2Q9UHD9 624 aa12.65□□□□□ -0.38
HSPG2-209ENST00000480900 U3KQ87 197 aa12.65□□□□□ -0.38
HSPG2-209ENST00000480900 IGHV3OR16-13A0A075B7E8 117 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 IGHV3-74A0A0B4J1X5 117 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 NAP1L6A6NFF2 107 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 VAMP1P23763 118 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 INPP1P49441 399 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 RND2P52198 227 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 TRIQKQ629K1 86 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 CENPSQ8N2Z9 138 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 OR1S2Q8NGQ3 325 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 OR1S1Q8NH92 325 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 DTD1Q8TEA8 209 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 ST8SIA2Q92186 375 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 RBKSQ9H477 322 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 NDUFA13Q9P0J0 144 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 TENM2Q9NT68 2774 aa12.64□□□□□ -0.39
HSPG2-209ENST00000480900 SFT2D2O95562 160 aa12.63□□□□□ -0.39
HSPG2-209ENST00000480900 IFNA10P01566 189 aa12.63□□□□□ -0.39
HSPG2-209ENST00000480900 IGLC1P0CG04 106 aa12.63□□□□□ -0.39
HSPG2-209ENST00000480900 SLC25A6P12236 298 aa12.63□□□□□ -0.39
HSPG2-209ENST00000480900 NPPCP23582 126 aa12.63□□□□□ -0.39
HSPG2-209ENST00000480900 CMC4P56277 68 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms