RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 FAM90A26D6RGX4 464 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 NUPL2O15504 423 aaKnown RBP9.16□□□□□ -0.94
CCM2-212ENST00000480382 GNG7O60262 68 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 IFNA10P01566 189 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 IFNA21P01568 189 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 CTSGP08311 255 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 FCGR2BP31994 310 aaPredicted RBP9.16□□□□□ -0.94
CCM2-212ENST00000480382 DUSP18Q8NEJ0 188 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 DYNLRB2Q8TF09 96 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 TMEM190Q8WZ59 177 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 ZNF414Q96IQ9 312 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 TXN2Q99757 166 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 MAGT1Q9H0U3 335 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 GAR1Q9NY12 217 aaKnown RBP9.16□□□□□ -0.94
CCM2-212ENST00000480382 SELENOKQ9Y6D0 94 aa9.16□□□□□ -0.94
CCM2-212ENST00000480382 TGP01266 2768 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 IGHV3OR16-8A0A075B7F1 116 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 NDUFA4O00483 81 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 CCSO14618 274 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 FOLR2P14207 255 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 GP9P14770 177 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 NPBWR1P48145 328 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 MLANAQ16655 118 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 TM4SF20Q53R12 229 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 NRARPQ7Z6K4 114 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 RNASEH2CQ8TDP1 164 aaKnown RBP9.15□□□□□ -0.94
CCM2-212ENST00000480382 ZNF431Q8TF32 576 aaPredicted RBP9.15□□□□□ -0.94
CCM2-212ENST00000480382 PALMDQ9NP74 551 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 UFC1Q9Y3C8 167 aa9.15□□□□□ -0.94
CCM2-212ENST00000480382 SORL1Q92673 2214 aa9.15□□□□□ -0.95
CCM2-212ENST00000480382 RPS10-NUDT3A0A1W2PQS6 291 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 IZUMO1RA6ND01 250 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 SYNGR2O43760 224 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 MED6O75586 246 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 SCGB1D2O95969 90 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 CBLN1P23435 193 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 DEFA1P59665 94 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 DEFA3P59666 94 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 RELQ04864 619 aaPredicted RBP9.14□□□□□ -0.95
CCM2-212ENST00000480382 IAH1Q2TAA2 248 aaPredicted RBP9.14□□□□□ -0.95
CCM2-212ENST00000480382 CD300EQ496F6 205 aaPredicted RBP9.14□□□□□ -0.95
CCM2-212ENST00000480382 LCN12Q6JVE5 192 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 UXS1Q8NBZ7 420 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 OR4D5Q8NGN0 318 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 OR10C1Q96KK4 312 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 C20orf24Q9BUV8 137 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 U3KQ87 197 aa9.14□□□□□ -0.95
CCM2-212ENST00000480382 C15orf62A8K5M9 175 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 WRBO00258 174 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 ZNF207O43670 478 aaKnown RBP9.13□□□□□ -0.95
CCM2-212ENST00000480382 CLN5O75503 358 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 YIF1AO95070 293 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 TMEM50AO95807 157 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 NKX2-1P43699 371 aaPredicted RBP9.13□□□□□ -0.95
CCM2-212ENST00000480382 RND2P52198 227 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 POLR2GP62487 172 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCM2-212ENST00000480382 DEFB121Q5J5C9 76 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 PRSS54Q6PEW0 395 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 BTNL8Q6UX41 500 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 SLC16A13Q7RTY0 426 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 NOXA1Q86UR1 476 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 ZBTB8BQ8NAP8 495 aaPredicted RBP9.13□□□□□ -0.95
CCM2-212ENST00000480382 OR4X1Q8NH49 305 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 DAZ1Q9NQZ3 744 aaKnown RBP9.13□□□□□ -0.95
CCM2-212ENST00000480382 MLXQ9UH92 298 aa9.13□□□□□ -0.95
CCM2-212ENST00000480382 PAIP2BQ9ULR5 123 aaKnown RBP9.13□□□□□ -0.95
CCM2-212ENST00000480382 FAM25EA8MYX2 175 aa9.12□□□□□ -0.95
CCM2-212ENST00000480382 H3BP45 60 aa9.12□□□□□ -0.95
CCM2-212ENST00000480382 SSSCA1O60232 199 aa9.12□□□□□ -0.95
CCM2-212ENST00000480382 IFNA4P05014 189 aa9.12□□□□□ -0.95
CCM2-212ENST00000480382 SLC25A4P12235 298 aa9.12□□□□□ -0.95
CCM2-212ENST00000480382 ELLP55199 621 aaPredicted RBP9.12□□□□□ -0.95
CCM2-212ENST00000480382 CD69Q07108 199 aa9.12□□□□□ -0.95
CCM2-212ENST00000480382 DEFB114Q30KQ6 69 aa9.12□□□□□ -0.95
CCM2-212ENST00000480382 ETFRF1Q6IPR1 90 aa9.12□□□□□ -0.95
CCM2-212ENST00000480382 C12orf45Q8N5I9 185 aaPredicted RBP9.12□□□□□ -0.95
CCM2-212ENST00000480382 OR2K2Q8NGT1 345 aa9.12□□□□□ -0.95
CCM2-212ENST00000480382 MARC2Q969Z3 335 aa9.12□□□□□ -0.95
CCM2-212ENST00000480382 CIB3Q96Q77 187 aaPredicted RBP9.12□□□□□ -0.95
CCM2-212ENST00000480382 TECRQ9NZ01 308 aaKnown RBP9.12□□□□□ -0.95
CCM2-212ENST00000480382 GSKIPQ9P0R6 139 aa9.12□□□□□ -0.95
CCM2-212ENST00000480382 LSM4Q9Y4Z0 139 aaKnown RBP9.12□□□□□ -0.95
CCM2-212ENST00000480382 SCGB2A1O75556 95 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 IL5P05113 134 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 C8orf88P0DMB2 117 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 ID3Q02535 119 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 TIGITQ495A1 244 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 TOMM20LQ6UXN7 152 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 ZNF600Q6ZNG1 722 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 TMEM61Q8N0U2 210 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 TMEM116Q8NCL8 245 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 WDR89Q96FK6 387 aaPredicted RBP9.11□□□□□ -0.95
CCM2-212ENST00000480382 ACY3Q96HD9 319 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 MRPL27Q9P0M9 148 aaKnown RBP9.11□□□□□ -0.95
CCM2-212ENST00000480382 PUS1Q9Y606 427 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCM2-212ENST00000480382 COL7A1Q02388 2944 aa9.11□□□□□ -0.95
CCM2-212ENST00000480382 DNAH9Q9NYC9 4486 aa9.1□□□□□ -0.95
CCM2-212ENST00000480382 C5orf51A6NDU8 294 aa9.1□□□□□ -0.95
CCM2-212ENST00000480382 INMT-MINDY4F8WBC2 141 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms