RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 CXorf1O96002 111 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 SRP19P09132 144 aaKnown RBP8.72□□□□□ -1.01
VTI1A-204ENST00000480057 OR5G3P0C626 314 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 DEFA4P12838 97 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 HIST1H1BP16401 226 aaKnown RBP8.72□□□□□ -1.01
VTI1A-204ENST00000480057 PAX6P26367 422 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 RND2P52198 227 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 MLANAQ16655 118 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 HAGHQ16775 308 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 FBLN7Q53RD9 439 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 C16orf82Q7Z2V1 217 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 OR1L4Q8NGR5 311 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 OR4X1Q8NH49 305 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 SUN5Q8TC36 379 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 GATAD1Q8WUU5 269 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 NPIPB3Q92617 1050 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 ZNF48Q96MX3 618 aaPredicted RBP8.72□□□□□ -1.01
VTI1A-204ENST00000480057 PFDN5Q99471 154 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 TXNDC17Q9BRA2 123 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 SLC25A33Q9BSK2 321 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 THYN1Q9P016 225 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 GNG13Q9P2W3 67 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 MOB4Q9Y3A3 225 aa8.72□□□□□ -1.01
VTI1A-204ENST00000480057 IGLV11-55A0A075B6I3 123 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 IGKV1D-37A0A075B6S9 117 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 A0A0U1RQK1 487 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 ZFP92A6NM28 416 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 M0QZK8 103 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 FABP1P07148 127 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 IGHV4-31P0DP07 118 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 IGHV4-38-2P0DP08 117 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 FGF8P55075 233 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-204ENST00000480057 TAS2R45P59539 299 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 NDPQ00604 133 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 DEFA5Q01523 94 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 KLF17Q5JT82 389 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-204ENST00000480057 ASPHD1Q5U4P2 390 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 C5orf56Q8N8D9 126 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 SGMS2Q8NHU3 365 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 PIFOQ8TCI5 191 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 RARRES2Q99969 163 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 PITPNC1Q9UKF7 332 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 FUT9Q9Y231 359 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 DMRT1Q9Y5R6 373 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 ARL2-SNX15V9GYD0 113 aa8.71□□□□□ -1.02
VTI1A-204ENST00000480057 WNK2Q9Y3S1 2297 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 TRAV30A0A087WSZ9 112 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 ELOA3CA0A087WX78 387 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-204ENST00000480057 PSMB11A5LHX3 300 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 RNF223E7ERA6 249 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 K7EIM0 57 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 FSHBP01225 129 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 EGR2P11161 476 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-204ENST00000480057 CRIP2P52943 208 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-204ENST00000480057 PLP1P60201 277 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 GCSAMLQ5JQS6 135 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 SOHLH1Q5JUK2 328 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 PQLC2Q6ZP29 291 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 C9orf139Q6ZV77 190 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 KRTAP1-3Q8IUG1 177 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 TEX29Q8N6K0 151 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 FAM110DQ8TAY7 271 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-204ENST00000480057 RXFP4Q8TDU9 374 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 SSX3Q99909 188 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 TNFRSF19Q9NS68 423 aa8.7□□□□□ -1.02
VTI1A-204ENST00000480057 TECRQ9NZ01 308 aaKnown RBP8.7□□□□□ -1.02
VTI1A-204ENST00000480057 A6NDX4 124 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 TMEM250H0YL14 139 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 CLN5O75503 358 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 SCGB2A1O75556 95 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 TGFAP01135 160 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 FCGR2BP31994 310 aaPredicted RBP8.69□□□□□ -1.02
VTI1A-204ENST00000480057 NPBWR1P48145 328 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 MEF2BQ02080 365 aaPredicted RBP8.69□□□□□ -1.02
VTI1A-204ENST00000480057 GUCA2BQ16661 112 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 AKIRIN2Q53H80 203 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 BRD3OSQ6XYD6 125 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 SPNS3Q6ZMD2 512 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 FANCD2OSQ96PS1 177 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 TXN2Q99757 166 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 NKX6-2Q9C056 277 aaPredicted RBP8.69□□□□□ -1.02
VTI1A-204ENST00000480057 SEPSECSQ9HD40 501 aaKnown RBP8.69□□□□□ -1.02
VTI1A-204ENST00000480057 DNAJC4Q9NNZ3 241 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 TMEM167BQ9NRX6 74 aa8.69□□□□□ -1.02
VTI1A-204ENST00000480057 MRPL36Q9P0J6 103 aaKnown RBP8.69□□□□□ -1.02
VTI1A-204ENST00000480057 NAV3Q8IVL0 2385 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 IGHV3OR16-10A0A075B7F0 116 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 BRI3O95415 125 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 AVPP01185 164 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 IGLC1P0CG04 106 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 ARL14EPLP0DKL9 152 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 C8orf88P0DMB2 117 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 APELAP0DMC3 54 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 GCHFRP30047 84 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 MFAP4P55083 255 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 FAM74A3Q4VXF1 159 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 FAM78BQ5VT40 261 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 CYB5R2Q6BCY4 276 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 CLRN3Q8NCR9 226 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 VN1R17PQ8TDU5 208 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms