RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 F2RL2O00254 374 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 OR2J3O76001 311 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 CCL3P10147 92 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 COX8AP10176 69 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 MFAP2P55001 183 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 OR1C1Q15619 314 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 LINC00173Q6ZV60 143 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 MKXQ8IYA7 352 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 VSTM2AQ8TAG5 236 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 ZNF837Q96EG3 531 aaPredicted RBP8.95□□□□□ -0.98
CHD6-208ENST00000480022 URB1-AS1Q96HZ7 61 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 GGTLC1Q9BX51 225 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 SPCS1Q9Y6A9 102 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 MED12Q93074 2177 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 TEX48A0A1B0GUV7 120 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 NPIPA3F8WFD2 350 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 FAM87AP0C7U9 286 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 PPOXP50336 477 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 ZNF816Q0VGE8 651 aaPredicted RBP8.95□□□□□ -0.98
CHD6-208ENST00000480022 TREML4Q6UXN2 200 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 RNF138Q8WVD3 245 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 MGST2Q99735 147 aa8.95□□□□□ -0.98
CHD6-208ENST00000480022 NAA38Q9BRA0 125 aaKnown RBP8.95□□□□□ -0.98
CHD6-208ENST00000480022 ANKRD11Q6UB99 2663 aaPredicted RBP8.94□□□□□ -0.98
CHD6-208ENST00000480022 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.94□□□□□ -0.98
CHD6-208ENST00000480022 CA1P00915 261 aaPredicted RBP8.94□□□□□ -0.98
CHD6-208ENST00000480022 FABP6P51161 128 aa8.94□□□□□ -0.98
CHD6-208ENST00000480022 CD300EQ496F6 205 aaPredicted RBP8.94□□□□□ -0.98
CHD6-208ENST00000480022 GDF5OSQ5U4N7 250 aa8.94□□□□□ -0.98
CHD6-208ENST00000480022 IGFL3Q6UXB1 125 aa8.94□□□□□ -0.98
CHD6-208ENST00000480022 MRPL21Q7Z2W9 205 aaKnown RBP8.94□□□□□ -0.98
CHD6-208ENST00000480022 YRDCQ86U90 279 aaKnown RBP8.94□□□□□ -0.98
CHD6-208ENST00000480022 MDS2Q8NDY4 140 aa8.94□□□□□ -0.98
CHD6-208ENST00000480022 PERPQ96FX8 193 aa8.94□□□□□ -0.98
CHD6-208ENST00000480022 IGHV1-24A0A0C4DH33 117 aa8.94□□□□□ -0.98
CHD6-208ENST00000480022 GAGE12HA6NDE8 117 aa8.94□□□□□ -0.98
CHD6-208ENST00000480022 MEF2CQ06413 473 aaPredicted RBP8.94□□□□□ -0.98
CHD6-208ENST00000480022 C9orf135Q5VTT2 229 aa8.94□□□□□ -0.98
CHD6-208ENST00000480022 SPATA31B1PQ5VZV4 182 aa8.94□□□□□ -0.98
CHD6-208ENST00000480022 HES7Q9BYE0 225 aa8.94□□□□□ -0.98
CHD6-208ENST00000480022 PROK2Q9HC23 129 aa8.94□□□□□ -0.98
CHD6-208ENST00000480022 MED13Q9UHV7 2174 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 FOXH1O75593 365 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 ZNF32P17041 273 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 ARL3P36405 182 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 EFNB3Q15768 340 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 KRTAP27-1Q3LI81 207 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 CHCHD1Q96BP2 118 aaKnown RBP8.93□□□□□ -0.98
CHD6-208ENST00000480022 OR2V2Q96R30 315 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 TRIB1Q96RU8 372 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 MAP1LC3CQ9BXW4 147 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 ATMQ13315 3056 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 TRAV24A0A0B4J272 114 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 A0A1W2PPM0 123 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 TMEM189A5PLL7 270 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 IGLV2-8P01709 118 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 PATE4P0C8F1 98 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 FOXE3Q13461 319 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 KIR3DS1Q14943 382 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 TCTEX1D4Q5JR98 221 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 H2BFWTQ7Z2G1 175 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 LINC00596Q86U02 117 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 ZADH2Q8N4Q0 377 aa8.93□□□□□ -0.98
CHD6-208ENST00000480022 TSSC4Q9Y5U2 329 aaPredicted RBP8.93□□□□□ -0.98
CHD6-208ENST00000480022 DSPP15924 2871 aaKnown RBP8.92□□□□□ -0.98
CHD6-208ENST00000480022 IGLV3-32A0A0A0MS00 114 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 IGHV3-15A0A0B4J1V0 119 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 FBLL1A6NHQ2 334 aaKnown RBP8.92□□□□□ -0.98
CHD6-208ENST00000480022 SNAI2O43623 268 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 P04436 131 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 SP1P08047 785 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 HERV-K104P63124 156 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 MOGAT3Q86VF5 341 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 MED12LQ86YW9 2145 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 TPRX1Q8N7U7 411 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 SSMEM1Q8WWF3 244 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 H1FXQ92522 213 aaKnown RBP8.92□□□□□ -0.98
CHD6-208ENST00000480022 SSBP3Q9BWW4 388 aaPredicted RBP8.92□□□□□ -0.98
CHD6-208ENST00000480022 PKIBQ9C010 78 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 FGF23Q9GZV9 251 aaPredicted RBP8.92□□□□□ -0.98
CHD6-208ENST00000480022 RAB1BQ9H0U4 201 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 ZNF71Q9NQZ8 489 aaPredicted RBP8.92□□□□□ -0.98
CHD6-208ENST00000480022 KCNIP1Q9NZI2 227 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 PTPRQQ9UMZ3 2332 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 ZNF207O43670 478 aaKnown RBP8.92□□□□□ -0.98
CHD6-208ENST00000480022 ZNF766Q5HY98 468 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 CCDC144NLQ6NUI1 221 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 ZNF788Q6ZQV5 615 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 SSX8Q7RTT4 187 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 RBMXL3Q8N7X1 1067 aaKnown RBP8.92□□□□□ -0.98
CHD6-208ENST00000480022 UBALD1Q8TB05 177 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 FAM168AQ92567 244 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 DAZAP1Q96EP5 407 aaKnown RBP8.92□□□□□ -0.98
CHD6-208ENST00000480022 MS4A5Q9H3V2 200 aa8.92□□□□□ -0.98
CHD6-208ENST00000480022 OR5AL1P0C617 328 aa8.91□□□□□ -0.98
CHD6-208ENST00000480022 FKBP2P26885 142 aaKnown RBP8.91□□□□□ -0.98
CHD6-208ENST00000480022 NTF4P34130 210 aa8.91□□□□□ -0.98
CHD6-208ENST00000480022 WIPI1Q5MNZ9 446 aaPredicted RBP8.91□□□□□ -0.98
CHD6-208ENST00000480022 FA2HQ7L5A8 372 aa8.91□□□□□ -0.98
CHD6-208ENST00000480022 MOB1BQ7L9L4 216 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms