RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 RPL31P62899 125 aaKnown RBP3.44□□□□□ -1.86
UPF3A-205ENST00000479712 ELF3P78545 371 aaPredicted RBP3.44□□□□□ -1.86
UPF3A-205ENST00000479712 YIF1BQ5BJH7 314 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 OR52W1Q6IF63 320 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 ASCL4Q6XD76 172 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 SLC25A26Q70HW3 274 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 VMO1Q7Z5L0 202 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 ANGPTL5Q86XS5 388 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 FAM58AQ8N1B3 248 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 Q8N7P7 452 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 OR51T1Q8NGJ9 327 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 GLYATL2Q8WU03 294 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 CYGBQ8WWM9 190 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 EEF1AKMT3Q96AZ1 226 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 SMIM19Q96E16 107 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 SEH1LQ96EE3 360 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 CDCA4Q9BXL8 241 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 VCX3BQ9H321 246 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 HMG20AQ9NP66 347 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 FKBP14Q9NWM8 211 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 ZMAT5Q9UDW3 170 aaKnown RBP3.44□□□□□ -1.86
UPF3A-205ENST00000479712 VPREB3Q9UKI3 123 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 LINC00312Q9Y6C7 94 aa3.44□□□□□ -1.86
UPF3A-205ENST00000479712 hADV38S2A0JD32 116 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 VGLL3A8MV65 326 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 SMKR1H3BMG3 65 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 L7N2F9 121 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 NPFFO15130 113 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 HAND1O96004 215 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 ARG1P05089 322 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 OCM2P0CE71 109 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 OCMP0CE72 109 aaPredicted RBP3.43□□□□□ -1.86
UPF3A-205ENST00000479712 ZNF728P0DKX0 622 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 CT45A6P0DMU7 189 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 CT45A5P0DMU8 189 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 CT45A7P0DMV0 189 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 IGFBP3P17936 291 aaPredicted RBP3.43□□□□□ -1.86
UPF3A-205ENST00000479712 RAB3AP20336 220 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 F2RP25116 425 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 RANBP1P43487 201 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 UBE2AP49459 152 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 ETV1P50549 477 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 DYNLT3P51808 116 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 DLX6P56179 175 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 PPP3R1P63098 170 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 ST3GAL4Q11206 333 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 GPR176Q14439 515 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 KISS1Q15726 138 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 Q499Y3 187 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 CT45A1Q5HYN5 189 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 LAIR2Q6ISS4 152 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 HCP5Q6MZN7 132 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 SH2D6Q7Z4S9 175 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 LINC00596Q86U02 117 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 PDZD9Q8IXQ8 264 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 ZFP41Q8N8Y5 198 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 OR11H6Q8NGC7 330 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 OR51A4Q8NGJ6 313 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 OR4C13Q8NGP0 309 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 OR13C9Q8NGT0 318 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 OR10J6PQ8NGY7 276 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 OR10AC1Q8NH08 325 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 CT45A3Q8NHU0 189 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 GPX8Q8TED1 209 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 H1FXQ92522 213 aaKnown RBP3.43□□□□□ -1.86
UPF3A-205ENST00000479712 RGP1Q92546 391 aaPredicted RBP3.43□□□□□ -1.86
UPF3A-205ENST00000479712 TMEM106AQ96A25 262 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 CREB3L1Q96BA8 519 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 MRPS24Q96EL2 167 aaKnown RBP3.43□□□□□ -1.86
UPF3A-205ENST00000479712 ZNF488Q96MN9 340 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 ANKRD60Q9BZ19 345 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 LINC00574Q9H8X3 128 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 EXOSC4Q9NPD3 245 aaKnown RBP3.43□□□□□ -1.86
UPF3A-205ENST00000479712 ISYNA1Q9NPH2 558 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 TMEM138Q9NPI0 162 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 C19orf12Q9NSK7 152 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 ZNRD1Q9P1U0 126 aa3.43□□□□□ -1.86
UPF3A-205ENST00000479712 TBL2Q9Y4P3 447 aaKnown RBP3.43□□□□□ -1.86
UPF3A-205ENST00000479712 IGLV11-55A0A075B6I3 123 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 IGKV1-12A0A0C4DH73 117 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 ERICH4A6NGS2 130 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 A6NIN4 97 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 ODF3BA8MYP8 253 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 MYL12BO14950 172 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 MRPS14O60783 128 aaKnown RBP3.42□□□□□ -1.86
UPF3A-205ENST00000479712 BRI3O95415 125 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 IGKV1D-12P01611 117 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 IFNA6P05013 189 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 GLAP06280 429 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 CDK1P06493 297 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 OR5H8P0DN80 308 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 CD37P11049 281 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 PRKACAP17612 351 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 PSMA1P25786 263 aaKnown RBP3.42□□□□□ -1.86
UPF3A-205ENST00000479712 CD34P28906 385 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 RND2P52198 227 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 RPS11P62280 158 aaKnown RBP eCLIP3.42□□□□□ -1.86
UPF3A-205ENST00000479712 TRAM1Q15629 374 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 LY6EQ16553 131 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 POU2AF1Q16633 256 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms