RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TMEM14BQ9NUH8 114 aa10.85□□□□□ -0.67
PDZRN3-208ENST00000479530 ZNRD1Q9P1U0 126 aa10.85□□□□□ -0.67
PDZRN3-208ENST00000479530 CIDEAO60543 219 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 MMP23AO75900 390 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 HLA-DQA1P01909 254 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 HSPE1P61604 102 aaKnown RBP10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 Q56UQ5 140 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 C1orf162Q8NEQ5 155 aaPredicted RBP10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 OR9G1Q8NH87 305 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 SSBP4Q9BWG4 385 aaPredicted RBP10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 ZNF355PQ9NSJ1 428 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 SLC35D1Q9NTN3 355 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 IDI2-AS1Q9NZ38 188 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 A0A1W2PN81 502 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 SRRM5B3KS81 715 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 RPL8P62917 257 aaKnown RBP10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 LEMD1Q68G75 181 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 LYG1Q8N1E2 194 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 ORAOV1Q8WV07 137 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 PLEKHA3Q9HB20 300 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 TMEM167BQ9NRX6 74 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 JPT1Q9UK76 154 aa10.84□□□□□ -0.67
PDZRN3-208ENST00000479530 PCNX1Q96RV3 2341 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 SAA2P0DJI9 122 aaPredicted RBP10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 PPOXP50336 477 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 CT45A1Q5HYN5 189 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 STUMQ69YW2 141 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 CT45A3Q8NHU0 189 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 ITLN1Q8WWA0 313 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 SLC25A10Q9UBX3 287 aaPredicted RBP10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 FAM215AQ9Y5M1 114 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 LOC105371242A0A075B767 164 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 IGLL1P15814 213 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 OR4S2Q8NH73 311 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 FOXA2Q9Y261 457 aaPredicted RBP10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 COX11Q9Y6N1 276 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 NAV3Q8IVL0 2385 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 DSCAMO60469 2012 aa10.83□□□□□ -0.68
PDZRN3-208ENST00000479530 IZUMO1RA6ND01 250 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 NKX6-3A6NJ46 265 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 SELENOVP59797 346 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 OR4F17Q8NGA8 305 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 ST6GALNAC6Q969X2 333 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 ENY2Q9NPA8 101 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 OR51B2Q9Y5P1 312 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 FAM181BA6NEQ2 426 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 REG1AP05451 166 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 MFAP2P55001 183 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 FAM27E3Q08E93 113 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 C19orf35Q6ZS72 473 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 KLHDC1Q8N7A1 406 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 TACC2O95359 2948 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 SH2D7A6NKC9 451 aaPredicted RBP10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 VWC2LB2RUY7 222 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 IGKV1-16P04430 117 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 UBE2V1Q13404 147 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 PMCHL1Q16048 86 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 ZCCHC24Q8N2G6 241 aaKnown RBP10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 ZNF331Q9NQX6 463 aaPredicted RBP10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 CLEC5AQ9NY25 188 aa10.82□□□□□ -0.68
PDZRN3-208ENST00000479530 IGHV2-26A0A0B4J1V2 119 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 K7EP13 123 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 TM4SF5O14894 197 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 HSBP1O75506 76 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 CD24P25063 80 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 RPL19P84098 196 aaKnown RBP10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 C17orf58Q2M2W7 97 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 NUP35Q8NFH5 326 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 CALYQ9NYX4 217 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 SRRM4A7MD48 611 aaKnown RBP10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 J3QR06 171 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 M0QZ24 198 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 M0R2Z0 102 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 PYYP10082 97 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 CAMPP49913 170 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 PRR27Q6MZM9 219 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 RNASEKQ6P5S7 137 aaKnown RBP10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 TRAT1Q6PIZ9 186 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 OR10W1Q8NGF6 305 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 SGK494Q96LW2 274 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 SLC25A33Q9BSK2 321 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 TNFRSF19Q9NS68 423 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 MRPS16Q9Y3D3 137 aaKnown RBP10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 ARL2-SNX15V9GYD0 113 aa10.81□□□□□ -0.68
PDZRN3-208ENST00000479530 PKDREJQ9NTG1 2253 aa10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 C2orf70A6NJV1 201 aa10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 CORTO00230 105 aa10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 F2RL2O00254 374 aa10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 MGST3O14880 152 aa10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 TOMM40O96008 361 aa10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 KLF3P57682 345 aaPredicted RBP10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 SSBP2P81877 361 aaPredicted RBP10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 RNF151Q2KHN1 245 aa10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 FAM167A-AS1Q96KT0 104 aa10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 TRAV9-2A0A087WT02 112 aa10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 MBD3L4A6NDZ8 208 aaPredicted RBP10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 MBD3L3A6NE82 208 aaPredicted RBP10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 MBD3L5A6NJ08 208 aaPredicted RBP10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 HSBP1L1C9JCN9 74 aa10.8□□□□□ -0.68
PDZRN3-208ENST00000479530 H0YJW9 148 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms