RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 FAM90A2PQ658T7 463 aa17.44■□□□□ 0.38
C9orf3-215ENST00000478473 CCDC190Q86UF4 302 aa17.44■□□□□ 0.38
C9orf3-215ENST00000478473 OR4X1Q8NH49 305 aa17.44■□□□□ 0.38
C9orf3-215ENST00000478473 RHPN1-AS1Q9BWJ2 59 aa17.44■□□□□ 0.38
C9orf3-215ENST00000478473 GGTLC1Q9BX51 225 aa17.44■□□□□ 0.38
C9orf3-215ENST00000478473 ENY2Q9NPA8 101 aa17.44■□□□□ 0.38
C9orf3-215ENST00000478473 CACNG5Q9UF02 275 aa17.44■□□□□ 0.38
C9orf3-215ENST00000478473 IGHV3OR16-8A0A075B7F1 116 aa17.43■□□□□ 0.38
C9orf3-215ENST00000478473 TRAV14DV4A0A0A6YYC5 116 aa17.43■□□□□ 0.38
C9orf3-215ENST00000478473 FAUP35544 74 aaKnown RBP17.43■□□□□ 0.38
C9orf3-215ENST00000478473 C2orf83Q53S99 150 aa17.43■□□□□ 0.38
C9orf3-215ENST00000478473 NMSQ5H8A3 153 aa17.43■□□□□ 0.38
C9orf3-215ENST00000478473 TOMM20LQ6UXN7 152 aa17.43■□□□□ 0.38
C9orf3-215ENST00000478473 ZNF600Q6ZNG1 722 aa17.43■□□□□ 0.38
C9orf3-215ENST00000478473 TMEM116Q8NCL8 245 aa17.43■□□□□ 0.38
C9orf3-215ENST00000478473 ZFAND3Q9H8U3 227 aa17.43■□□□□ 0.38
C9orf3-215ENST00000478473 LOC102724200A0A096LPH7 203 aaPredicted RBP17.42■□□□□ 0.38
C9orf3-215ENST00000478473 A0A0B4J2A0 478 aa17.42■□□□□ 0.38
C9orf3-215ENST00000478473 OR4C46A6NHA9 309 aa17.42■□□□□ 0.38
C9orf3-215ENST00000478473 ZNF207O43670 478 aaKnown RBP17.42■□□□□ 0.38
C9orf3-215ENST00000478473 CLN5O75503 358 aa17.42■□□□□ 0.38
C9orf3-215ENST00000478473 CD5P06127 495 aa17.42■□□□□ 0.38
C9orf3-215ENST00000478473 AP3S2P59780 193 aa17.42■□□□□ 0.38
C9orf3-215ENST00000478473 ODF3L2Q3SX64 289 aa17.42■□□□□ 0.38
C9orf3-215ENST00000478473 RNF2Q99496 336 aa17.42■□□□□ 0.38
C9orf3-215ENST00000478473 GINS3Q9BRX5 216 aa17.42■□□□□ 0.38
C9orf3-215ENST00000478473 VSIRQ9H7M9 311 aa17.42■□□□□ 0.38
C9orf3-215ENST00000478473 MCUBQ9NWR8 336 aa17.42■□□□□ 0.38
C9orf3-215ENST00000478473 MRPL36Q9P0J6 103 aaKnown RBP17.42■□□□□ 0.38
C9orf3-215ENST00000478473 SHPKQ9UHJ6 478 aa17.42■□□□□ 0.38
C9orf3-215ENST00000478473 YIF1AO95070 293 aa17.41■□□□□ 0.38
C9orf3-215ENST00000478473 RETNQ9HD89 108 aa17.41■□□□□ 0.38
C9orf3-215ENST00000478473 PIGBOS1A0A0B4J2F0 54 aa17.4■□□□□ 0.38
C9orf3-215ENST00000478473 SULT1A3P0DMM9 295 aa17.4■□□□□ 0.38
C9orf3-215ENST00000478473 SULT1A4P0DMN0 295 aa17.4■□□□□ 0.38
C9orf3-215ENST00000478473 S100A5P33763 92 aa17.4■□□□□ 0.38
C9orf3-215ENST00000478473 SRPXP78539 464 aa17.4■□□□□ 0.38
C9orf3-215ENST00000478473 RNASEH2CQ8TDP1 164 aaKnown RBP17.4■□□□□ 0.38
C9orf3-215ENST00000478473 A0A1B0GU03 582 aa17.39■□□□□ 0.37
C9orf3-215ENST00000478473 OPRK1P41145 380 aa17.39■□□□□ 0.37
C9orf3-215ENST00000478473 CCR6P51684 374 aa17.39■□□□□ 0.37
C9orf3-215ENST00000478473 MLANAQ16655 118 aa17.39■□□□□ 0.37
C9orf3-215ENST00000478473 PYDC2Q56P42 97 aa17.39■□□□□ 0.37
C9orf3-215ENST00000478473 TOMM5Q8N4H5 51 aa17.39■□□□□ 0.37
C9orf3-215ENST00000478473 TMEM170AQ8WVE7 144 aa17.39■□□□□ 0.37
C9orf3-215ENST00000478473 HEYLQ9NQ87 328 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-215ENST00000478473 HSPB7Q9UBY9 170 aa17.39■□□□□ 0.37
C9orf3-215ENST00000478473 PUS1Q9Y606 427 aaKnown RBP eCLIP17.39■□□□□ 0.37
C9orf3-215ENST00000478473 CSMD3Q7Z407 3707 aa17.38■□□□□ 0.37
C9orf3-215ENST00000478473 TRAV30A0A087WSZ9 112 aa17.38■□□□□ 0.37
C9orf3-215ENST00000478473 CCDC160A6NGH7 325 aa17.38■□□□□ 0.37
C9orf3-215ENST00000478473 IGKV1-17P01599 117 aa17.38■□□□□ 0.37
C9orf3-215ENST00000478473 BMI1P35226 326 aa17.38■□□□□ 0.37
C9orf3-215ENST00000478473 CMC4P56277 68 aaPredicted RBP17.38■□□□□ 0.37
C9orf3-215ENST00000478473 TMEM128Q5BJH2 165 aa17.38■□□□□ 0.37
C9orf3-215ENST00000478473 LGI3Q8N145 548 aa17.38■□□□□ 0.37
C9orf3-215ENST00000478473 SLC24A4Q8NFF2 622 aa17.38■□□□□ 0.37
C9orf3-215ENST00000478473 SLC25A21Q9BQT8 299 aaPredicted RBP17.38■□□□□ 0.37
C9orf3-215ENST00000478473 KIR2DL5BA0A0G2JN68 375 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 KIR2DL5BA0A0G2JPC4 375 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 DUXBA0A1W2PPF3 345 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 RPS10-NUDT3A0A1W2PQS6 291 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 SLC25A4P12235 298 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 ANXA3P12429 323 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 AKR1C4P17516 323 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 LYZL2Q7Z4W2 148 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 KIR2DL5AQ8N109 375 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 LRTM2Q8N967 370 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 KIR2DL5BQ8NHK3 375 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 TP53TG1Q9Y2A0 90 aa17.37■□□□□ 0.37
C9orf3-215ENST00000478473 DYNC2H1Q8NCM8 4307 aaKnown RBP17.36■□□□□ 0.37
C9orf3-215ENST00000478473 TRAV2A0A0B4J234 112 aa17.36■□□□□ 0.37
C9orf3-215ENST00000478473 UBE2CO00762 179 aa17.36■□□□□ 0.37
C9orf3-215ENST00000478473 TNFRSF9Q07011 255 aa17.36■□□□□ 0.37
C9orf3-215ENST00000478473 SMCO1Q147U7 214 aa17.36■□□□□ 0.37
C9orf3-215ENST00000478473 PRSS54Q6PEW0 395 aa17.36■□□□□ 0.37
C9orf3-215ENST00000478473 Q6ZWC4 215 aa17.36■□□□□ 0.37
C9orf3-215ENST00000478473 NOXA1Q86UR1 476 aa17.36■□□□□ 0.37
C9orf3-215ENST00000478473 WFDC3Q8IUB2 231 aa17.36■□□□□ 0.37
C9orf3-215ENST00000478473 OVOL2Q9BRP0 275 aa17.36■□□□□ 0.37
C9orf3-215ENST00000478473 PRR13Q9NZ81 148 aa17.36■□□□□ 0.37
C9orf3-215ENST00000478473 CEBPZOSA8MTT3 80 aa17.35■□□□□ 0.37
C9orf3-215ENST00000478473 SCGB2A1O75556 95 aa17.35■□□□□ 0.37
C9orf3-215ENST00000478473 IGLC1P0CG04 106 aa17.35■□□□□ 0.37
C9orf3-215ENST00000478473 CRYBB3P26998 211 aa17.35■□□□□ 0.37
C9orf3-215ENST00000478473 ATP5IP56385 69 aaPredicted RBP17.35■□□□□ 0.37
C9orf3-215ENST00000478473 ST8SIA2Q92186 375 aa17.35■□□□□ 0.37
C9orf3-215ENST00000478473 SRRQ9GZT4 340 aa17.35■□□□□ 0.37
C9orf3-215ENST00000478473 UBQLN2Q9UHD9 624 aa17.35■□□□□ 0.37
C9orf3-215ENST00000478473 U3KQ87 197 aa17.35■□□□□ 0.37
C9orf3-215ENST00000478473 STARD9Q9P2P6 4700 aa17.35■□□□□ 0.37
C9orf3-215ENST00000478473 IGHV3-49A0A0A0MS15 119 aa17.34■□□□□ 0.37
C9orf3-215ENST00000478473 PITX3O75364 302 aa17.34■□□□□ 0.37
C9orf3-215ENST00000478473 APOHP02749 345 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-215ENST00000478473 NPY1RP25929 384 aa17.34■□□□□ 0.37
C9orf3-215ENST00000478473 APOC4P55056 127 aa17.34■□□□□ 0.37
C9orf3-215ENST00000478473 TCF24Q7RTU0 167 aa17.34■□□□□ 0.37
C9orf3-215ENST00000478473 LILRB2Q8N423 598 aa17.34■□□□□ 0.37
C9orf3-215ENST00000478473 IL17DQ8TAD2 202 aa17.34■□□□□ 0.37
C9orf3-215ENST00000478473 SLC25A6P12236 298 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms