RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 SMIM9A6NGZ8 99 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 K7EMT4 169 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 AIPO00170 330 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 CA11O75493 328 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 GPX5O75715 221 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 OR2J3O76001 311 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 DHFRP00374 187 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 CTSDP07339 412 aaPredicted RBP2.86□□□□□ -1.95
VPS50-214ENST00000477935 SAA2P0DJI9 122 aaPredicted RBP2.86□□□□□ -1.95
VPS50-214ENST00000477935 RRM2P31350 389 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 CAV2P51636 162 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 DEFA5Q01523 94 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 SYT6Q5T7P8 510 aaPredicted RBP2.86□□□□□ -1.95
VPS50-214ENST00000477935 LPCAT4Q643R3 524 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 CLEC19AQ6UXS0 136 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 UNQ9165/PRO28630Q6UXU0 137 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 PDPNQ86YL7 162 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 PXT1Q8NFP0 134 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 GIPC3Q8TF64 312 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 EEF1AKMT3Q96AZ1 226 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 FGGYQ96C11 551 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 CPNE2Q96FN4 548 aaPredicted RBP2.86□□□□□ -1.95
VPS50-214ENST00000477935 C7orf34Q96L11 122 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 EBF4Q9BQW3 602 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 UQCC2Q9BRT2 126 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 SPACA1Q9HBV2 294 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 GID8Q9NWU2 228 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 KCNIP1Q9NZI2 227 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 TRAPPC2LQ9UL33 140 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 ZNF257Q9Y2Q1 563 aa2.86□□□□□ -1.95
VPS50-214ENST00000477935 F8WDY8 70 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 DYNC1I1O14576 645 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 ITGB1BP1O14713 200 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 RS1O15537 224 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 CREBL2O60519 120 aaPredicted RBP2.85□□□□□ -1.95
VPS50-214ENST00000477935 OR7C1O76099 320 aaPredicted RBP2.85□□□□□ -1.95
VPS50-214ENST00000477935 APOA2P02652 100 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 HMGN1P05114 100 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 CRYGBP07316 175 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 UBCP0CG48 685 aaKnown RBP2.85□□□□□ -1.95
VPS50-214ENST00000477935 HIST1H1BP16401 226 aaKnown RBP2.85□□□□□ -1.95
VPS50-214ENST00000477935 HCCSP53701 268 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 NUTF2P61970 127 aaKnown RBP2.85□□□□□ -1.95
VPS50-214ENST00000477935 RIPK1Q13546 671 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 MPV17LQ2QL34 196 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 TIGITQ495A1 244 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 TMEM244Q5VVB8 128 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 NXNL2Q5VZ03 156 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 ZNF322Q6U7Q0 402 aaPredicted RBP2.85□□□□□ -1.95
VPS50-214ENST00000477935 PLET1Q6UQ28 207 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 SSX7Q7RTT5 188 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 GAPTQ8N292 157 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 OR5D18Q8NGL1 313 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 OR8D4Q8NGM9 314 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 TRUB1Q8WWH5 349 aaKnown RBP2.85□□□□□ -1.95
VPS50-214ENST00000477935 FAM104AQ969W3 186 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 GALMQ96C23 342 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 PELI1Q96FA3 418 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 OR2A7Q96R45 310 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 TMEM109Q9BVC6 243 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 ZNF436Q9C0F3 470 aaPredicted RBP2.85□□□□□ -1.95
VPS50-214ENST00000477935 TAF9BQ9HBM6 251 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 CRCT1Q9UGL9 99 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 LINC00588Q9Y4M8 146 aa2.85□□□□□ -1.95
VPS50-214ENST00000477935 A0A087WTM6 91 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 TRAV2A0A0B4J234 112 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 BBIP1A8MTZ0 92 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 MCRIP1C9JLW8 97 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 NDUFAB1O14561 156 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 RGS16O15492 202 aaPredicted RBP2.84□□□□□ -1.95
VPS50-214ENST00000477935 ZNF780AO75290 641 aaPredicted RBP2.84□□□□□ -1.95
VPS50-214ENST00000477935 SCGB2A1O75556 95 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 DIRAS1O95057 198 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 PRH1P02810 166 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 IGKV1-16P04430 117 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 KRT8P05787 483 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 RPSAP08865 295 aaKnown RBP2.84□□□□□ -1.95
VPS50-214ENST00000477935 APELAP0DMC3 54 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 HTN3P15516 51 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 PPP1CCP36873 323 aaKnown RBP2.84□□□□□ -1.95
VPS50-214ENST00000477935 RND3P61587 244 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 PJVKQ0ZLH3 352 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 CLINT1Q14677 625 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 RSU1Q15404 277 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 KISS1Q15726 138 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 ATP6AP1Q15904 470 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 KLK9Q2XQG4 91 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 LELP1Q5T871 98 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 Q6ZRN7 208 aaPredicted RBP2.84□□□□□ -1.95
VPS50-214ENST00000477935 ARPINQ7Z6K5 226 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 Q8N9L7 120 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 NEK7Q8TDX7 302 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 SRSF12Q8WXF0 261 aaKnown RBP2.84□□□□□ -1.95
VPS50-214ENST00000477935 MCUR1Q96AQ8 359 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 ADAT3Q96EY9 351 aaPredicted RBP2.84□□□□□ -1.95
VPS50-214ENST00000477935 APOL4Q9BPW4 351 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 UPK3BQ9BT76 320 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 IFI27L2Q9H2X8 130 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 TAS2R1Q9NYW7 299 aa2.84□□□□□ -1.95
VPS50-214ENST00000477935 KLK9Q9UKQ9 250 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms