RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 RAB4AP20338 218 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 BPIFB3P59826 476 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 MLANAQ16655 118 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 TOMM20LQ6UXN7 152 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 SIGLECL1Q8N7X8 197 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 SNHG12Q9BXW3 62 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 RNASE7Q9H1E1 156 aaKnown RBP14.65□□□□□ -0.06
CCM2-209ENST00000477605 ZNF430Q9H8G1 570 aaPredicted RBP14.65□□□□□ -0.06
CCM2-209ENST00000477605 PRR14LQ5THK1 2151 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 IZUMO1RA6ND01 250 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 EREGO14944 169 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 REG1AP05451 166 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 GPX1P07203 203 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 UBE2L3P68036 154 aaKnown RBP14.65□□□□□ -0.06
CCM2-209ENST00000477605 TMEM183BQ1AE95 376 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 TMEM200BQ69YZ2 307 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 TGIF2LXQ8IUE1 241 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 THAP8Q8NA92 274 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 CHRDL1Q9BU40 450 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 GNB4Q9HAV0 340 aa14.65□□□□□ -0.06
CCM2-209ENST00000477605 HEATR1Q9H583 2144 aaKnown RBP14.65□□□□□ -0.06
CCM2-209ENST00000477605 COX7A2P2O60397 106 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 CHRNB4P30926 498 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 DMRTC2Q8IXT2 367 aaPredicted RBP14.64□□□□□ -0.07
CCM2-209ENST00000477605 WIPF2Q8TF74 440 aaPredicted RBP14.64□□□□□ -0.07
CCM2-209ENST00000477605 SNRNP40Q96DI7 357 aaKnown RBP14.64□□□□□ -0.07
CCM2-209ENST00000477605 FAM208BQ5VWN6 2430 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 TCRBV4S1A1TA0A5B7 111 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 COL8A2P25067 703 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 CCL8P80075 99 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 C10orf113Q5VZT2 155 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 C22orf34Q6ZV56 151 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 OR2T6Q8NHC8 308 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 NEU1Q99519 415 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 MIEN1Q9BRT3 115 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 CBLN4Q9NTU7 201 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 DCAF16Q9NXF7 216 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 ZNF586Q9NXT0 402 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 ZNRD1Q9P1U0 126 aa14.64□□□□□ -0.07
CCM2-209ENST00000477605 DSCAMO60469 2012 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 DSCAML1Q8TD84 2053 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 PPIAL4EA0A075B759 164 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 PPIAL4DF5H284 164 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 C16orf97H3BN30 126 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 TCAPO15273 167 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 PPIAL4FP0DN26 164 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 ZNF137PP52743 207 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 RBMXL3Q8N7X1 1067 aaKnown RBP14.63□□□□□ -0.07
CCM2-209ENST00000477605 STXBP6Q8NFX7 210 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 OR10X1Q8NGY0 326 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 PAXXQ9BUH6 204 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 RALYQ9UKM9 306 aaKnown RBP14.63□□□□□ -0.07
CCM2-209ENST00000477605 WASHC3Q9Y3C0 194 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 AMMECR1Q9Y4X0 333 aaPredicted RBP14.63□□□□□ -0.07
CCM2-209ENST00000477605 PPIAL4AQ9Y536 164 aa14.63□□□□□ -0.07
CCM2-209ENST00000477605 FRMD6-AS1P0C7T7 363 aa14.62□□□□□ -0.07
CCM2-209ENST00000477605 MGST1P10620 155 aaKnown RBP14.62□□□□□ -0.07
CCM2-209ENST00000477605 MC5RP33032 325 aa14.62□□□□□ -0.07
CCM2-209ENST00000477605 ADIPOQQ15848 244 aa14.62□□□□□ -0.07
CCM2-209ENST00000477605 ITPR1Q14643 2758 aa14.62□□□□□ -0.07
CCM2-209ENST00000477605 VSTM5A8MXK1 200 aa14.62□□□□□ -0.07
CCM2-209ENST00000477605 TMEM178BH3BS89 294 aa14.62□□□□□ -0.07
CCM2-209ENST00000477605 TNFRSF13BO14836 293 aaPredicted RBP14.62□□□□□ -0.07
CCM2-209ENST00000477605 FXYD3Q14802 87 aa14.62□□□□□ -0.07
CCM2-209ENST00000477605 ETFRF1Q6IPR1 90 aa14.62□□□□□ -0.07
CCM2-209ENST00000477605 ST6GALNAC6Q969X2 333 aa14.62□□□□□ -0.07
CCM2-209ENST00000477605 KCNS1Q96KK3 526 aa14.62□□□□□ -0.07
CCM2-209ENST00000477605 PTPRQQ9UMZ3 2332 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 NDUFB3O43676 98 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 CCL3L1P16619 93 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 WT1-ASQ06250 92 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 VMA21Q3ZAQ7 101 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 LRRC10Q5BKY1 277 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 SMIM12Q96EX1 92 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 VAMP8Q9BV40 100 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 ZNF331Q9NQX6 463 aaPredicted RBP14.61□□□□□ -0.07
CCM2-209ENST00000477605 ZNF355PQ9NSJ1 428 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 TANC2Q9HCD6 1990 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 TRAV5A0A0B4J249 113 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 CGB1A6NKQ9 187 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 IGLV2-23P01705 113 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 LGALS7P47929 136 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 TDGF1P3P51864 188 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 PVRIGQ6DKI7 326 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 ZNF329Q86UD4 541 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 MBD6Q96DN6 1003 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 GRAMD2BQ96HH9 432 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 SERTAD4Q9NUC0 356 aa14.61□□□□□ -0.07
CCM2-209ENST00000477605 PEX7O00628 323 aa14.6□□□□□ -0.07
CCM2-209ENST00000477605 APCSP02743 223 aa14.6□□□□□ -0.07
CCM2-209ENST00000477605 MORN5Q5VZ52 161 aa14.6□□□□□ -0.07
CCM2-209ENST00000477605 SPACA3Q8IXA5 215 aa14.6□□□□□ -0.07
CCM2-209ENST00000477605 OR4B1Q8NGF8 309 aa14.6□□□□□ -0.07
CCM2-209ENST00000477605 NPIPB3Q92617 1050 aa14.6□□□□□ -0.07
CCM2-209ENST00000477605 FNDC4Q9H6D8 234 aaPredicted RBP14.6□□□□□ -0.07
CCM2-209ENST00000477605 SAP30LQ9HAJ7 183 aa14.6□□□□□ -0.07
CCM2-209ENST00000477605 IGKV1D-37A0A075B6S9 117 aa14.59□□□□□ -0.07
CCM2-209ENST00000477605 DPRXA6NFQ7 191 aa14.59□□□□□ -0.07
CCM2-209ENST00000477605 F2Z2F3 143 aa14.59□□□□□ -0.07
CCM2-209ENST00000477605 BMPR1BO00238 502 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms