RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 SCGB2A1O75556 95 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 OR2C1O95371 312 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 PRB2P02812 416 aaPredicted RBP9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 C8orf88P0DMB2 117 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 GPR183P32249 361 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 NPBWR1P48145 328 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 HOXA1P49639 335 aaPredicted RBP9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 RELQ04864 619 aaPredicted RBP9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 IAH1Q2TAA2 248 aaPredicted RBP9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 GSG1LQ6UXU4 331 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 UXS1Q8NBZ7 420 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 RNASEH2CQ8TDP1 164 aaKnown RBP9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 B9D2Q9BPU9 175 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 HIPK2Q9H2X6 1198 aa9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 MRPL27Q9P0M9 148 aaKnown RBP9.4□□□□□ -0.9
CLCNKA-205ENST00000477360 C2orf70A6NJV1 201 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 A8MZ25 164 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 F8W735 103 aaPredicted RBP9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 CCSO14618 274 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 NUPL2O15504 423 aaKnown RBP9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 MED6O75586 246 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 CTSGP08311 255 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 NHLRC4P0CG21 123 aaPredicted RBP9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 RNASE2P10153 161 aaKnown RBP9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 GP9P14770 177 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 RRAS2P62070 204 aaPredicted RBP9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 CYCSP99999 105 aaKnown RBP9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 C2orf83Q53S99 150 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 ASB13Q8WXK3 278 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 TMEM190Q8WZ59 177 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 NMES1Q9C002 83 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 ZC4H2Q9NQZ6 224 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 U3KQ87 197 aa9.39□□□□□ -0.91
CLCNKA-205ENST00000477360 TRAV25A0A0B4J276 109 aa9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 RPS10-NUDT3A0A1W2PQS6 291 aa9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 TMEM213A2RRL7 107 aa9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 C5orf51A6NDU8 294 aa9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 C15orf62A8K5M9 175 aa9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 MT-CO2P00403 227 aa9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 FOLR2P14207 255 aa9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 CBLN1P23435 193 aa9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 NKX2-1P43699 371 aaPredicted RBP9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 CIB3Q96Q77 187 aaPredicted RBP9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 MED28Q9H204 178 aa9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 HEYLQ9NQ87 328 aaPredicted RBP9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 DAZ1Q9NQZ3 744 aaKnown RBP9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 SMAD5-AS1Q9Y6J3 95 aa9.38□□□□□ -0.91
CLCNKA-205ENST00000477360 TRAV30A0A087WSZ9 112 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 OR2T8A6NH00 312 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 GOSR2O14653 212 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 SYNGR2O43760 224 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 SLC25A4P12235 298 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 ADMP35318 185 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 H2BFSP57053 126 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 TAS2R30P59541 319 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 DEFB114Q30KQ6 69 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 DEFB121Q5J5C9 76 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 ETFRF1Q6IPR1 90 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 SLC24A4Q8NFF2 622 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 OR4X1Q8NH49 305 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 DTD1Q8TEA8 209 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 MISP3Q96FF7 219 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 RBKSQ9H477 322 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 MGAT4CQ9UBM8 478 aa9.37□□□□□ -0.91
CLCNKA-205ENST00000477360 CEBPZOSA8MTT3 80 aa9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 GNG7O60262 68 aa9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 IGHV3-23P01764 117 aa9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 MBPP02686 304 aaPredicted RBP9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 CD5P06127 495 aa9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 FCN2Q15485 313 aa9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 Q56UQ5 140 aa9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 ADAMTSL5Q6ZMM2 481 aa9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 TMEM116Q8NCL8 245 aa9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 CHAC2Q8WUX2 184 aa9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 PRR25Q96S07 402 aa9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 CHRDL1Q9BU40 450 aa9.36□□□□□ -0.91
CLCNKA-205ENST00000477360 ZNF320A2RRD8 509 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 FAM25EA8MYX2 175 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 CLN5O75503 358 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 SIX6O95475 246 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 CXCL3P19876 107 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 NPY1RP25929 384 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 GTSCR1Q86UQ5 136 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 Q8N1Y9 231 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 OR11H7Q8NGC8 314 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 DYNLRB2Q8TF09 96 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 SMIM8Q96KF7 97 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 RAB40CQ96S21 281 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 C11orf1Q9H5F2 150 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 GSKIPQ9P0R6 139 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 RCL1Q9Y2P8 373 aaKnown RBP9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 S4R3C0 116 aa9.35□□□□□ -0.91
CLCNKA-205ENST00000477360 K7EPK0 472 aa9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 WRBO00258 174 aa9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 GIPP09681 153 aaPredicted RBP9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 BMI1P35226 326 aa9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 GPX4P36969 197 aaPredicted RBP9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 OPRK1P41145 380 aa9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 POLR2GP62487 172 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLCNKA-205ENST00000477360 RPP30P78346 268 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms