RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 RPL27AP46776 148 aaKnown RBP9.2□□□□□ -0.94
NUP188-205ENST00000477069 PPP1R27Q86WC6 154 aa9.2□□□□□ -0.94
NUP188-205ENST00000477069 NPIPB3Q92617 1050 aa9.2□□□□□ -0.94
NUP188-205ENST00000477069 RPEQ96AT9 228 aa9.2□□□□□ -0.94
NUP188-205ENST00000477069 M0R1W7 72 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 TNXAQ16473 311 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 TPTE2P1Q5T6R2 138 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 PATE2Q6UY27 113 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 CFHR4Q92496 578 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 TACC2O95359 2948 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 ATRXP46100 2492 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 C9JCJ5 164 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 TRGC1P0CF51 173 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 C8orf88P0DMB2 117 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 ZNF90Q03938 601 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 OR5B12Q96R08 314 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 IMMP2LQ96T52 175 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 RNF2Q99496 336 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 SSBP3Q9BWW4 388 aaPredicted RBP9.19□□□□□ -0.94
NUP188-205ENST00000477069 AURKAIP1Q9NWT8 199 aaPredicted RBP9.19□□□□□ -0.94
NUP188-205ENST00000477069 DMRT1Q9Y5R6 373 aa9.19□□□□□ -0.94
NUP188-205ENST00000477069 TYMSP04818 313 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 SMIM6P0DI80 62 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 TAS2R45P59539 299 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 C19orf35Q6ZS72 473 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 OCC1Q8TAD7 63 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 ITLN2Q8WWU7 325 aaPredicted RBP9.18□□□□□ -0.94
NUP188-205ENST00000477069 LY96Q9Y6Y9 160 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 GGTLC3B5MD39 225 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 K7EN84 100 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 IGHV3-48P01763 117 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 S100PP25815 95 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 CDX1P47902 265 aaPredicted RBP9.18□□□□□ -0.94
NUP188-205ENST00000477069 S100A12P80511 92 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 MRPL41Q8IXM3 137 aaKnown RBP9.18□□□□□ -0.94
NUP188-205ENST00000477069 OR1P1Q8NH06 330 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 SFRP2Q96HF1 295 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 UHRF2Q96PU4 802 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 DNAJC4Q9NNZ3 241 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 TRAV20A0A0B4J274 112 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 TIMM23O14925 209 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 PPP1R2P9O14990 202 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 NDUFA6P56556 154 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 ARF6P62330 175 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 OR4X1Q8NH49 305 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 FBXL15Q9H469 300 aa9.18□□□□□ -0.94
NUP188-205ENST00000477069 LOC105371242A0A075B767 164 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 TRAV5A0A0B4J249 113 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 A6NNC1 897 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 OR7C2O60412 319 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 PRTN3P24158 256 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 UQCRFS1P47985 274 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 SELENOTP62341 195 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 C4orf17Q53FE4 359 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 ETFRF1Q6IPR1 90 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 TEX38Q6PEX7 206 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 TMEM116Q8NCL8 245 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 OR5T1Q8NG75 326 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 PFDN5Q99471 154 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 TCEAL7Q9BRU2 100 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 F11RQ9Y624 299 aaKnown RBP9.17□□□□□ -0.94
NUP188-205ENST00000477069 A0A1W2PRE2 83 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 FCN1O00602 326 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 HTR1DP28221 377 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 OR1L4Q8NGR5 311 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 OR2T10Q8NGZ9 312 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 TRGV9Q99603 122 aa9.17□□□□□ -0.94
NUP188-205ENST00000477069 PLXNB1O43157 2135 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 OR10J4P0C629 311 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 LGALS4P56470 323 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 LCN2P80188 198 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 FOXL1Q12952 345 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 KLRD1Q13241 179 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 KIR3DL3Q8N743 410 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 SRSF12Q8WXF0 261 aaKnown RBP9.16□□□□□ -0.94
NUP188-205ENST00000477069 MISP3Q96FF7 219 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 EAF1Q96JC9 268 aaPredicted RBP9.16□□□□□ -0.94
NUP188-205ENST00000477069 DPM3Q9P2X0 92 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 A0A1W2PPQ1 181 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 CORTO00230 105 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 NDUFA3O95167 84 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 FAM3BP58499 235 aaPredicted RBP9.16□□□□□ -0.94
NUP188-205ENST00000477069 FBLN7Q53RD9 439 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 ACTL10Q5JWF8 245 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 C10orf113Q5VZT2 155 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 C1orf122Q6ZSJ8 110 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 NPBQ8NG41 125 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 RBM14Q96PK6 669 aaKnown RBP9.16□□□□□ -0.94
NUP188-205ENST00000477069 SRSF8Q9BRL6 282 aaKnown RBP9.16□□□□□ -0.94
NUP188-205ENST00000477069 ZNF355PQ9NSJ1 428 aa9.16□□□□□ -0.94
NUP188-205ENST00000477069 COX7A2P2O60397 106 aa9.15□□□□□ -0.94
NUP188-205ENST00000477069 APELAP0DMC3 54 aa9.15□□□□□ -0.94
NUP188-205ENST00000477069 CDKN1AP38936 164 aa9.15□□□□□ -0.94
NUP188-205ENST00000477069 KCNIP4Q6PIL6 250 aa9.15□□□□□ -0.94
NUP188-205ENST00000477069 LHFPL4Q7Z7J7 247 aa9.15□□□□□ -0.94
NUP188-205ENST00000477069 OR5AU1Q8NGC0 362 aa9.15□□□□□ -0.94
NUP188-205ENST00000477069 MDFIC2A0A1B0GVS7 189 aa9.15□□□□□ -0.94
NUP188-205ENST00000477069 PPP5D1E7EU14 171 aa9.15□□□□□ -0.94
NUP188-205ENST00000477069 C19orf84I3L1E1 186 aa9.15□□□□□ -0.94
NUP188-205ENST00000477069 MOSP00540 346 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms