RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 UPK1BO75841 260 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 CBLN1P23435 193 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 ZNF846Q147U1 533 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 DEFB114Q30KQ6 69 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 LINC00299Q6ZSB3 139 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 UXS1Q8NBZ7 420 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 S100ZQ8WXG8 99 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 TMEM190Q8WZ59 177 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 WDR89Q96FK6 387 aaPredicted RBP9.38□□□□□ -0.91
APTX-220ENST00000476858 BSCL2Q96G97 398 aaPredicted RBP9.38□□□□□ -0.91
APTX-220ENST00000476858 OR10C1Q96KK4 312 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 WFDC10AQ9H1F0 79 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 BATF3Q9NR55 127 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 NUDT15Q9NV35 164 aa9.38□□□□□ -0.91
APTX-220ENST00000476858 A0A1B0GU03 582 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 CENPXA8MT69 81 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 MFAP4P55083 255 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 SRPXP78539 464 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 ASAH1Q13510 395 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 C4orf46Q504U0 113 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 C2orf83Q53S99 150 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 BTNL8Q6UX41 500 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 SLC24A4Q8NFF2 622 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 OR1L6Q8NGR2 347 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 DTD1Q8TEA8 209 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 ASCL2Q99929 193 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 ENY2Q9NPA8 101 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 SIGLEC8Q9NYZ4 499 aa9.37□□□□□ -0.91
APTX-220ENST00000476858 IGHV3OR16-13A0A075B7E8 117 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 IGHV3-74A0A0B4J1X5 117 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 C15orf62A8K5M9 175 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 TMEM50AO95807 157 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 APOHP02749 345 aaPredicted RBP9.36□□□□□ -0.91
APTX-220ENST00000476858 C8orf88P0DMB2 117 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 FCGR2BP31994 310 aaPredicted RBP9.36□□□□□ -0.91
APTX-220ENST00000476858 OPRK1P41145 380 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 TATDN3Q17R31 274 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 TIGITQ495A1 244 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 FAM106AQ4KMX7 169 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 PRSS54Q6PEW0 395 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 LILRB2Q8N423 598 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 C20orf24Q9BUV8 137 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 PGPEP1Q9NXJ5 209 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 PEMTQ9UBM1 199 aa9.36□□□□□ -0.91
APTX-220ENST00000476858 DUXBA0A1W2PPF3 345 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 CYB5BO43169 146 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 CCNKO75909 580 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 IGKV1-17P01599 117 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 CD7P09564 240 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 H2AFB2P0C5Z0 115 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 NPY1RP25929 384 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 HTR2BP41595 481 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 POLR2GP62487 172 aaKnown RBP eCLIP9.35□□□□□ -0.91
APTX-220ENST00000476858 TOMM20LQ6UXN7 152 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 NRARPQ7Z6K4 114 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 OR4D5Q8NGN0 318 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 MITD1Q8WV92 249 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 WDR12Q9GZL7 423 aaKnown RBP9.35□□□□□ -0.91
APTX-220ENST00000476858 TMED3Q9Y3Q3 217 aa9.35□□□□□ -0.91
APTX-220ENST00000476858 IGHV3-66A0A0C4DH42 116 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 FAM240BA0A1B0GVZ2 78 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 H3BP45 60 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 WRBO00258 174 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 NDUFA4O00483 81 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 GNG7O60262 68 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 SCAF4O95104 1147 aaKnown RBP9.34□□□□□ -0.91
APTX-220ENST00000476858 IFNA10P01566 189 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 RND2P52198 227 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 PAX9P55771 341 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 SPSB3Q6PJ21 355 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 DYNLRB2Q8TF09 96 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 TXN2Q99757 166 aa9.34□□□□□ -0.91
APTX-220ENST00000476858 SORL1Q92673 2214 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 PRSS46E5RG02 174 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 NUPL2O15504 423 aaKnown RBP9.33□□□□□ -0.92
APTX-220ENST00000476858 CLN5O75503 358 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 YIF1AO95070 293 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 SLC25A6P12236 298 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 SUB1P53999 127 aaKnown RBP eCLIP9.33□□□□□ -0.92
APTX-220ENST00000476858 ID3Q02535 119 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 GUCA2BQ16661 112 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 GSG1LQ6UXU4 331 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 DUSP18Q8NEJ0 188 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 OR4X1Q8NH49 305 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 COQ8AQ8NI60 647 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 NPIPB3Q92617 1050 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 ACY3Q96HD9 319 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 ATP6V0BQ99437 205 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 HIPK2Q9H2X6 1198 aa9.33□□□□□ -0.92
APTX-220ENST00000476858 PUS1Q9Y606 427 aaKnown RBP eCLIP9.33□□□□□ -0.92
APTX-220ENST00000476858 IGKV1D-37A0A075B6S9 117 aa9.32□□□□□ -0.92
APTX-220ENST00000476858 SYNGR2O43760 224 aa9.32□□□□□ -0.92
APTX-220ENST00000476858 FRMD6-AS1P0C7T7 363 aa9.32□□□□□ -0.92
APTX-220ENST00000476858 IGLC1P0CG04 106 aa9.32□□□□□ -0.92
APTX-220ENST00000476858 IGHV4-30-4P0DP06 118 aa9.32□□□□□ -0.92
APTX-220ENST00000476858 CD69Q07108 199 aa9.32□□□□□ -0.92
APTX-220ENST00000476858 LCN12Q6JVE5 192 aa9.32□□□□□ -0.92
APTX-220ENST00000476858 SLC16A13Q7RTY0 426 aa9.32□□□□□ -0.92
APTX-220ENST00000476858 SBSPONQ8IVN8 264 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms